RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SALL3Q9BXA9 1300 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-223ENST00000533079 H3BRB1 525 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 GGPS1O95749 300 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 MMP1P03956 469 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 GOLGA8HP0CJ92 632 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 HIC1Q14526 733 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 QRICH1Q2TAL8 776 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 IQCA1Q86XH1 822 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 RNF135Q8IUD6 432 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 TBC1D5Q92609 795 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 PPP2R3CQ969Q6 453 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 IL17RAQ96F46 866 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 PDCD2LQ9BRP1 358 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 TUT1Q9H6E5 874 aaKnown RBP14.48□□□□□ -0.09
CAPN1-223ENST00000533079 UPP2O95045 317 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 CFBP00751 764 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 UBA1P22314 1058 aaKnown RBP14.47□□□□□ -0.09
CAPN1-223ENST00000533079 RRP1P56182 461 aaKnown RBP14.47□□□□□ -0.09
CAPN1-223ENST00000533079 HYAL1Q12794 435 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 SUGP1Q8IWZ8 645 aaKnown RBP14.47□□□□□ -0.09
CAPN1-223ENST00000533079 PRSS33Q8NF86 280 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 CLP1Q92989 425 aaKnown RBP14.47□□□□□ -0.09
CAPN1-223ENST00000533079 PLVAPQ9BX97 442 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 UBA5Q9GZZ9 404 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 KAT14Q9H8E8 782 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 CD207Q9UJ71 328 aa14.47□□□□□ -0.09
CAPN1-223ENST00000533079 STXBP3O00186 592 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 TBX10O75333 385 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 RGS20O76081 388 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 LINC00271P0C7V0 271 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 SMIM10L2AP0DMW4 78 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 SMIM10L2BP0DMW5 78 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 BMPR1AP36894 532 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 MFAP1P55081 439 aaKnown RBP14.46□□□□□ -0.09
CAPN1-223ENST00000533079 FAM26DQ5JW98 314 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 C20orf194Q5TEA3 1177 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 STOX1Q6ZVD7 989 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 TBC1D10CQ8IV04 446 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 OTUD7AQ8TE49 926 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-223ENST00000533079 AMNQ9BXJ7 453 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 USP26Q9BXU7 913 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 IRF2BPLQ9H1B7 796 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 CPVLQ9H3G5 476 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 MLXIPQ9HAP2 919 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 RC3H2Q9HBD1 1191 aaKnown RBP14.46□□□□□ -0.09
CAPN1-223ENST00000533079 PPP4R2Q9NY27 417 aa14.46□□□□□ -0.09
CAPN1-223ENST00000533079 NEDD4P46934 1319 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 MYH6P13533 1939 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 A0A0D9SFI3 127 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 TREHO43280 583 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 DHX16O60231 1041 aaKnown RBP14.45□□□□□ -0.1
CAPN1-223ENST00000533079 EYA4O95677 639 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 LGALS2P05162 132 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 CTSHP09668 335 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 CCND2P30279 289 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 TRAF1Q13077 416 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 PGM5Q15124 567 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 GNPTABQ3T906 1256 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 NAALADL2Q58DX5 795 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 TRIM67Q6ZTA4 783 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 VSIG10LQ86VR7 867 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 KMT2EQ8IZD2 1858 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 ANKS1AQ92625 1134 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 P2RX5Q93086 422 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 JMJD4Q9H9V9 463 aa14.45□□□□□ -0.1
CAPN1-223ENST00000533079 ZNF215Q9UL58 517 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-223ENST00000533079 TMEM221A6NGB7 291 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 M0R296 226 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 NOP56O00567 594 aaKnown RBP14.44□□□□□ -0.1
CAPN1-223ENST00000533079 OPLAHO14841 1288 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 GRM6O15303 877 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 STAM2O75886 525 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 PARP1P09874 1014 aaKnown RBP14.44□□□□□ -0.1
CAPN1-223ENST00000533079 MYCLP12524 364 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-223ENST00000533079 HAND2P61296 217 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 FOXK2Q01167 660 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 DLX2Q07687 328 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-223ENST00000533079 MSLNLQ96KJ4 702 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 FAM227BQ96M60 508 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 RNPEPQ9H4A4 650 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-223ENST00000533079 MYH7BA7E2Y1 1941 aa14.44□□□□□ -0.1
CAPN1-223ENST00000533079 FSD2A1L4K1 749 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 NDUFV1P49821 464 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 SP2Q02086 613 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 CLUL1Q15846 466 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 METTL7BQ6UX53 244 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 ZNF589Q86UQ0 364 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-223ENST00000533079 FBXL6Q8N531 539 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 SMRP1Q8NCR6 262 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 PBXIP1Q96AQ6 731 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 ZNF689Q96CS4 500 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-223ENST00000533079 ZSCAN10Q96SZ4 725 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-223ENST00000533079 ZKSCAN3Q9BRR0 538 aa14.43□□□□□ -0.1
CAPN1-223ENST00000533079 NRCAMQ92823 1304 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 TRIM6-TRIM34B2RNG4 842 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 LOC730098B7Z3J9 87 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 ZNF213O14771 459 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms