RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ADSSL1Q8N142 457 aa20.56■□□□□ 0.88
PVT1-220ENST00000524165 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
PVT1-220ENST00000524165 IWS1Q96ST2 819 aa20.56■□□□□ 0.88
PVT1-220ENST00000524165 TTC3P53804 2025 aa20.56■□□□□ 0.88
PVT1-220ENST00000524165 KIAA1671Q9BY89 1806 aa20.55■□□□□ 0.88
PVT1-220ENST00000524165 RNF113AO15541 343 aaKnown RBP20.55■□□□□ 0.88
PVT1-220ENST00000524165 HMMRO75330 724 aa20.55■□□□□ 0.88
PVT1-220ENST00000524165 PDGFBP01127 241 aaPredicted RBP20.55■□□□□ 0.88
PVT1-220ENST00000524165 ZFYP08048 801 aaPredicted RBP20.55■□□□□ 0.88
PVT1-220ENST00000524165 HOXC8P31273 242 aa20.55■□□□□ 0.88
PVT1-220ENST00000524165 NAALADL2Q58DX5 795 aa20.55■□□□□ 0.88
PVT1-220ENST00000524165 NSUN6Q8TEA1 469 aaKnown RBP20.55■□□□□ 0.88
PVT1-220ENST00000524165 ATP6V0A1Q93050 837 aa20.55■□□□□ 0.88
PVT1-220ENST00000524165 OSBPL7Q9BZF2 842 aa20.55■□□□□ 0.88
PVT1-220ENST00000524165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.55■□□□□ 0.88
PVT1-220ENST00000524165 C17orf102A2RUQ5 167 aa20.54■□□□□ 0.88
PVT1-220ENST00000524165 CSPG5O95196 566 aa20.54■□□□□ 0.88
PVT1-220ENST00000524165 GLP2RO95838 553 aa20.54■□□□□ 0.88
PVT1-220ENST00000524165 ADGRD2Q7Z7M1 963 aa20.54■□□□□ 0.88
PVT1-220ENST00000524165 EP300Q09472 2414 aaPredicted RBP20.53■□□□□ 0.88
PVT1-220ENST00000524165 M0R2C6 588 aa20.53■□□□□ 0.88
PVT1-220ENST00000524165 FRMD5Q7Z6J6 570 aa20.53■□□□□ 0.88
PVT1-220ENST00000524165 SUSD6Q92537 303 aa20.53■□□□□ 0.88
PVT1-220ENST00000524165 ZNF689Q96CS4 500 aaPredicted RBP20.53■□□□□ 0.88
PVT1-220ENST00000524165 NAPBQ9H115 298 aa20.53■□□□□ 0.88
PVT1-220ENST00000524165 GPCPD1Q9NPB8 672 aa20.53■□□□□ 0.88
PVT1-220ENST00000524165 BARX2Q9UMQ3 279 aaPredicted RBP20.53■□□□□ 0.88
PVT1-220ENST00000524165 MYO10Q9HD67 2058 aa20.53■□□□□ 0.88
PVT1-220ENST00000524165 DNAH14Q0VDD8 3507 aa20.53■□□□□ 0.88
PVT1-220ENST00000524165 FRMPD2Q68DX3 1309 aaPredicted RBP20.53■□□□□ 0.88
PVT1-220ENST00000524165 TPRP12270 2363 aaKnown RBP20.52■□□□□ 0.88
PVT1-220ENST00000524165 MED19A0JLT2 244 aaPredicted RBP20.52■□□□□ 0.88
PVT1-220ENST00000524165 EIF3JO75822 258 aaKnown RBP20.52■□□□□ 0.88
PVT1-220ENST00000524165 DNAJB1P25685 340 aa20.52■□□□□ 0.88
PVT1-220ENST00000524165 NRIP1P48552 1158 aa20.52■□□□□ 0.88
PVT1-220ENST00000524165 BTG3Q14201 252 aaPredicted RBP20.52■□□□□ 0.88
PVT1-220ENST00000524165 TAAR1Q96RJ0 339 aa20.52■□□□□ 0.88
PVT1-220ENST00000524165 MRVI1Q9Y6F6 885 aa20.52■□□□□ 0.88
PVT1-220ENST00000524165 NCOR2Q9Y618 2525 aa20.52■□□□□ 0.87
PVT1-220ENST00000524165 TREHO43280 583 aa20.51■□□□□ 0.87
PVT1-220ENST00000524165 CTSHP09668 335 aa20.51■□□□□ 0.87
PVT1-220ENST00000524165 FAM26DQ5JW98 314 aa20.51■□□□□ 0.87
PVT1-220ENST00000524165 TMEM105Q8N8V8 129 aa20.51■□□□□ 0.87
PVT1-220ENST00000524165 SPPL3Q8TCT6 385 aa20.51■□□□□ 0.87
PVT1-220ENST00000524165 SYTL5Q8TDW5 730 aaPredicted RBP20.51■□□□□ 0.87
PVT1-220ENST00000524165 C16orf70Q9BSU1 422 aa20.51■□□□□ 0.87
PVT1-220ENST00000524165 KRT37O76014 449 aa20.5■□□□□ 0.87
PVT1-220ENST00000524165 RGS20O76081 388 aa20.5■□□□□ 0.87
PVT1-220ENST00000524165 ITGB1P05556 798 aa20.5■□□□□ 0.87
PVT1-220ENST00000524165 TOP1P11387 765 aaKnown RBP20.5■□□□□ 0.87
PVT1-220ENST00000524165 MYSM1Q5VVJ2 828 aa20.5■□□□□ 0.87
PVT1-220ENST00000524165 ZBTB33Q86T24 672 aa20.5■□□□□ 0.87
PVT1-220ENST00000524165 RMDN3Q96TC7 470 aa20.5■□□□□ 0.87
PVT1-220ENST00000524165 PLXNA4Q9HCM2 1894 aa20.5■□□□□ 0.87
PVT1-220ENST00000524165 FSD2A1L4K1 749 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 PDHBP11177 359 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 HSDL1Q3SXM5 330 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 USH1GQ495M9 461 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 RBM23Q86U06 439 aaKnown RBP20.49■□□□□ 0.87
PVT1-220ENST00000524165 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 UBALD2Q8IYN6 164 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 SPATA33Q96N06 139 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 RNPEPQ9H4A4 650 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 COL20A1Q9P218 1284 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 KAT6AQ92794 2004 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 MYH6P13533 1939 aa20.49■□□□□ 0.87
PVT1-220ENST00000524165 RANBP6O60518 1105 aaKnown RBP20.48■□□□□ 0.87
PVT1-220ENST00000524165 DGKIO75912 1065 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 SMIM10L2AP0DMW4 78 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 SMIM10L2BP0DMW5 78 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 CELF3Q5SZQ8 465 aaKnown RBP20.48■□□□□ 0.87
PVT1-220ENST00000524165 KCNV1Q6PIU1 500 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 DGLUCYQ7Z3D6 616 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 ATP8B4Q8TF62 1192 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 POF1BQ8WVV4 589 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 TBC1D5Q92609 795 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 TMEM47Q9BQJ4 181 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 ECHDC1Q9NTX5 307 aa20.48■□□□□ 0.87
PVT1-220ENST00000524165 H3BRB1 525 aa20.47■□□□□ 0.87
PVT1-220ENST00000524165 ZNF543Q08ER8 600 aa20.47■□□□□ 0.87
PVT1-220ENST00000524165 ARHGEF16Q5VV41 709 aa20.47■□□□□ 0.87
PVT1-220ENST00000524165 RMDN1Q96DB5 314 aa20.47■□□□□ 0.87
PVT1-220ENST00000524165 TUT1Q9H6E5 874 aaKnown RBP20.47■□□□□ 0.87
PVT1-220ENST00000524165 MRPL42Q9Y6G3 142 aaKnown RBP20.47■□□□□ 0.87
PVT1-220ENST00000524165 ABCB11O95342 1321 aa20.47■□□□□ 0.87
PVT1-220ENST00000524165 ENPP3O14638 875 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 NR3C2P08235 984 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 GNAT1P11488 350 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 CTDSPL2Q05D32 466 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 MTMR3Q13615 1198 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 ASTLQ6HA08 431 aaPredicted RBP20.46■□□□□ 0.87
PVT1-220ENST00000524165 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 CMTR2Q8IYT2 770 aaKnown RBP20.46■□□□□ 0.87
PVT1-220ENST00000524165 KLHL23Q8NBE8 558 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 KREMEN2Q8NCW0 462 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 TLE6Q9H808 572 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 SORCS3Q9UPU3 1222 aa20.46■□□□□ 0.87
PVT1-220ENST00000524165 ORC4O43929 436 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 SNHG28P0DPA3 235 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 EIF2AK2P19525 551 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms