RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.08■■□□□ 1.453e-6■■□□□ 13
PCM1-210ENST00000518936 ZDHHC9Q9Y397 364 aa24.08■■□□□ 1.45
PCM1-210ENST00000518936 KPNA6O60684 536 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 GGPS1O95749 300 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 ARP10275 920 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 KCNA2P16389 499 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 NCLP19338 710 aaKnown RBP24.07■■□□□ 1.44
PCM1-210ENST00000518936 UBA1P22314 1058 aaKnown RBP24.07■■□□□ 1.44
PCM1-210ENST00000518936 JAK3P52333 1124 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 PRAMEF19Q5SWL8 479 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 OR6J1Q8NGC5 347 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 ZNF333Q96JL9 665 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 SLC9A2Q9UBY0 812 aa24.07■■□□□ 1.44
PCM1-210ENST00000518936 LY6KQ17RY6 165 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 RNF180Q86T96 592 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 TLK2Q86UE8 772 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 ARRDC4Q8NCT1 418 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 PPTC7Q8NI37 304 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 ERMNQ8TAM6 284 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 MTMR9Q96QG7 549 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 MCOLN1Q9GZU1 580 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 RNF208Q9H0X6 261 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 PDGFCQ9NRA1 345 aa24.06■■□□□ 1.44
PCM1-210ENST00000518936 GNEQ9Y223 722 aaKnown RBP24.06■■□□□ 1.44
PCM1-210ENST00000518936 WDR64B1ANS9 1081 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 DKC1O60832 514 aaKnown RBP eCLIP24.05■■□□□ 1.44
PCM1-210ENST00000518936 PPP6R2O75170 966 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 SMPD1P17405 629 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 SEMA3FQ13275 785 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 PDIA5Q14554 519 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 SLC39A14Q15043 492 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 ZFP91Q96JP5 570 aaPredicted RBP24.05■■□□□ 1.44
PCM1-210ENST00000518936 AK8Q96MA6 479 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 TMEM106CQ9BVX2 250 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 TTC12Q9H892 705 aaPredicted RBP24.05■■□□□ 1.44
PCM1-210ENST00000518936 XPNPEP3Q9NQH7 507 aa24.05■■□□□ 1.44
PCM1-210ENST00000518936 PAK6Q9NQU5 681 aaPredicted RBP24.05■■□□□ 1.44
PCM1-210ENST00000518936 EDIL3O43854 480 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 CCL5P13501 91 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 CCND3P30281 292 aaPredicted RBP24.04■■□□□ 1.44
PCM1-210ENST00000518936 FXR2P51116 673 aaKnown RBP eCLIP24.04■■□□□ 1.442e-12■□□□□ 8.6
PCM1-210ENST00000518936 GJA9P57773 515 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 TRIM32Q13049 653 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 PPP2R5CQ13362 524 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 CYFIP1Q7L576 1253 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 PCSK9Q8NBP7 692 aaKnown RBP24.04■■□□□ 1.44
PCM1-210ENST00000518936 TRPV1Q8NER1 839 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 TNPO1Q92973 898 aaKnown RBP24.04■■□□□ 1.44
PCM1-210ENST00000518936 SPATA33Q96N06 139 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 USP28Q96RU2 1077 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 ELP1O95163 1332 aa24.04■■□□□ 1.44
PCM1-210ENST00000518936 SPTLC2O15270 562 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 SLC26A4O43511 780 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 PSMD10O75832 226 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 FARP2O94887 1054 aaPredicted RBP24.03■■□□□ 1.44
PCM1-210ENST00000518936 LONP1P36776 959 aaKnown RBP24.03■■□□□ 1.44
PCM1-210ENST00000518936 TXKP42681 527 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 NKX3-2P78367 333 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 DNM1Q05193 864 aaKnown RBP24.03■■□□□ 1.44
PCM1-210ENST00000518936 DGKDQ16760 1214 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 HAUS3Q68CZ6 603 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 MIS18BP1Q6P0N0 1132 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 NEK9Q8TD19 979 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 SEPT1Q8WYJ6 367 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 SPATA32Q96LK8 384 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 GBP4Q96PP9 640 aa24.03■■□□□ 1.44
PCM1-210ENST00000518936 UPF3AQ9H1J1 476 aaKnown RBP24.03■■□□□ 1.44
PCM1-210ENST00000518936 DDX49Q9Y6V7 483 aaKnown RBP24.03■■□□□ 1.44
PCM1-210ENST00000518936 DYNC1LI2O43237 492 aaPredicted RBP24.02■■□□□ 1.44
PCM1-210ENST00000518936 PPFIA4O75335 1185 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 ARIH2O95376 493 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 PSAPP07602 524 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 TXLNAP40222 546 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 NBR1Q14596 966 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 FAM173BQ6P4H8 233 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 KRI1Q8N9T8 703 aaKnown RBP24.02■■□□□ 1.44
PCM1-210ENST00000518936 LINC00301Q8NCQ3 95 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 HAS1Q92839 578 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 AZI2Q9H6S1 392 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 SAMM50Q9Y512 469 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 PCDHA10Q9Y5I2 948 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 CLIC4Q9Y696 253 aa24.02■■□□□ 1.44
PCM1-210ENST00000518936 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.01■■□□□ 1.43
PCM1-210ENST00000518936 ATP9AO75110 1047 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 GJB1P08034 283 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 CST5P28325 142 aaPredicted RBP24.01■■□□□ 1.43
PCM1-210ENST00000518936 SLC26A2P50443 739 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 CEBPZQ03701 1054 aaKnown RBP24.01■■□□□ 1.43
PCM1-210ENST00000518936 ARHGAP1Q07960 439 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 ITGB3BPQ13352 177 aaPredicted RBP24.01■■□□□ 1.43
PCM1-210ENST00000518936 FAM160B1Q5W0V3 765 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 KCTD17Q8N5Z5 321 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 C4orf32Q8N8J7 132 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 KATNAL1Q9BW62 490 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 UNC93B1Q9H1C4 597 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 PKD2L1Q9P0L9 805 aa24.01■■□□□ 1.43
PCM1-210ENST00000518936 ZNF215Q9UL58 517 aaPredicted RBP24.01■■□□□ 1.43
PCM1-210ENST00000518936 SRPRBQ9Y5M8 271 aaKnown RBP24.01■■□□□ 1.43
PCM1-210ENST00000518936 A6NJR5 290 aa24■■□□□ 1.43
PCM1-210ENST00000518936 DHX15O43143 795 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms