RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 NSUN6Q8TEA1 469 aaKnown RBP11.57□□□□□ -0.56
SH2D4A-202ENST00000518040 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
SH2D4A-202ENST00000518040 IGFLR1Q9H665 355 aa11.57□□□□□ -0.56
SH2D4A-202ENST00000518040 PTPRZ1P23471 2315 aaPredicted RBP11.57□□□□□ -0.56
SH2D4A-202ENST00000518040 RLBP1P12271 317 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 ICAM3P32942 547 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 SLC16A2P36021 539 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 NBL1P41271 181 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 ID4P47928 161 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 NAALADL2Q58DX5 795 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 CLP1Q92989 425 aaKnown RBP11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 WNT8BQ93098 351 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 PHF7Q9BWX1 381 aaPredicted RBP11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 IL17RBQ9NRM6 502 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 DDX41Q9UJV9 622 aaKnown RBP11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 C5orf42Q9H799 3197 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 SPTBN4Q9H254 2564 aa11.56□□□□□ -0.56
SH2D4A-202ENST00000518040 FSD2A1L4K1 749 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 PRR23AA6NEV1 266 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 H0Y858 1186 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 GRM6O15303 877 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 HOXD8P13378 290 aaPredicted RBP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 VCPP55072 806 aaKnown RBP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 MCTP2Q6DN12 878 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 KCNV1Q6PIU1 500 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 P2RX5Q93086 422 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 ASIC4Q96FT7 647 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 TLR9Q9NR96 1032 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 ADGRA3Q8IWK6 1321 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 C17orf102A2RUQ5 167 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 EIF3JO75822 258 aaKnown RBP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 ATF7P17544 494 aaPredicted RBP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 RRP1P56182 461 aaKnown RBP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 ASCL5Q7RTU5 278 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 EFHBQ8N7U6 833 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 ATP6V0A1Q93050 837 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 ECHDC1Q9NTX5 307 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 MRVI1Q9Y6F6 885 aa11.55□□□□□ -0.56
SH2D4A-202ENST00000518040 KDM4AO75164 1064 aa11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 ZNF286BP0CG31 522 aa11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 TOP1P11387 765 aaKnown RBP11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 MS4A1P11836 297 aa11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 ZNF200P98182 395 aaPredicted RBP11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 MCF2L2Q86YR7 1114 aa11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 GPATCH3Q96I76 525 aa11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 PLXNA3P51805 1871 aa11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 MYO7AQ13402 2215 aa11.54□□□□□ -0.56
SH2D4A-202ENST00000518040 LINC01565O15544 149 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 NMT2O60551 498 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 GNAT1P11488 350 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 PTPN21Q16825 1174 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 RASGRP2Q7LDG7 609 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 RIPOR3Q96MK2 946 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 RMDN3Q96TC7 470 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 LRRCC1Q9C099 1032 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 CHMP4BQ9H444 224 aaKnown RBP11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 INCENPQ9NQS7 918 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 CLEC1BQ9P126 229 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 KIAA1217Q5T5P2 1943 aa11.53□□□□□ -0.56
SH2D4A-202ENST00000518040 M0R2C6 588 aa11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 LINC00271P0C7V0 271 aa11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 HOXC8P31273 242 aa11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 GTF2F1P35269 517 aaKnown RBP eCLIP11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 BTG3Q14201 252 aaPredicted RBP11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 RPGRIP1Q96KN7 1286 aa11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 PLAGL2Q9UPG8 496 aa11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.56
SH2D4A-202ENST00000518040 ABCB11O95342 1321 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 ATG2AQ2TAZ0 1938 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 ORC4O43929 436 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 PDHBP11177 359 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 ARHGEF16Q5VV41 709 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 SYTL5Q8TDW5 730 aaPredicted RBP11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 SPATA33Q96N06 139 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 TAAR1Q96RJ0 339 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 RC3H2Q9HBD1 1191 aaKnown RBP11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 TCP11L1Q9NUJ3 509 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 ANAPC4Q9UJX5 808 aa11.52□□□□□ -0.57
SH2D4A-202ENST00000518040 FAM186AA6NE01 2351 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 H3BRB1 525 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 TGFB3P10600 412 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 HIC1Q14526 733 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 USH1GQ495M9 461 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 FAM26DQ5JW98 314 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 ZBTB33Q86T24 672 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 SIRT2Q8IXJ6 389 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 UBALD2Q8IYN6 164 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 ZNF689Q96CS4 500 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms