RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 A6NNZ2 444 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 TTLL1O95922 423 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 PAFAH1B1P43034 410 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 CORO7P57737 925 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 SKOR1P84550 965 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 APBA1Q02410 837 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 SLC18A3Q16572 532 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 EDRF1Q3B7T1 1238 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 TUBB8Q3ZCM7 444 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 CFAP221Q4G0U5 840 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 MFSD14BQ5SR56 506 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 FAM83BQ5T0W9 1011 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 GPATCH4Q5T3I0 446 aaKnown RBP7.36□□□□□ -1.23
CDH12-203ENST00000517378 SFMBT2Q5VUG0 894 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 MOXD1Q6UVY6 613 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 SND1Q7KZF4 910 aaKnown RBP eCLIP7.36□□□□□ -1.23
CDH12-203ENST00000517378 CACNA2D4Q7Z3S7 1137 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 EIF1ADQ8N9N8 165 aaKnown RBP7.36□□□□□ -1.23
CDH12-203ENST00000517378 C1orf131Q8NDD1 294 aaKnown RBP7.36□□□□□ -1.23
CDH12-203ENST00000517378 CUL5Q93034 780 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 GANQ9H2C0 597 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 VAT1LQ9HCJ6 419 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 PANK4Q9NVE7 773 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 GGA1Q9UJY5 639 aa7.36□□□□□ -1.23
CDH12-203ENST00000517378 ADAMTSL1Q8N6G6 1762 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 GRIN2DO15399 1336 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 CYP3A7-CYP3A51PA0A087WV96 503 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 OPA1O60313 960 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 CYP3A7P24462 503 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 MAGEA9P43362 315 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 MEI1Q5TIA1 1274 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 CCDC181Q5TID7 509 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 EMC10Q5UCC4 262 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 PRR5LQ6MZQ0 368 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 C8orf74Q6P047 294 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 ADGRF4Q8IZF3 695 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 GPR101Q96P66 508 aaPredicted RBP7.35□□□□□ -1.23
CDH12-203ENST00000517378 INPP4AQ96PE3 977 aaPredicted RBP7.35□□□□□ -1.23
CDH12-203ENST00000517378 GLT8D2Q9H1C3 349 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 KCNMB3Q9NPA1 279 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 RBM12Q9NTZ6 932 aaKnown RBP7.35□□□□□ -1.23
CDH12-203ENST00000517378 NRXN2Q9P2S2 1712 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 ATXN2Q99700 1313 aaKnown RBP7.35□□□□□ -1.23
CDH12-203ENST00000517378 TRIM66O15016 1216 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 CPP00450 1065 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 MYBP10242 640 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 AKR1B1P15121 316 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 TNNI2P48788 182 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 RASSF7Q02833 373 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 C10orf76Q5T2E6 689 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 DPY19L2P1Q6NXN4 242 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 CD302Q8IX05 232 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 CCDC65Q8IXS2 484 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 TSEN2Q8NCE0 465 aaKnown RBP7.35□□□□□ -1.23
CDH12-203ENST00000517378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.35□□□□□ -1.231e-10■■■■■ 87.1
CDH12-203ENST00000517378 DRC1Q96MC2 740 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 GDAP1L1Q96MZ0 367 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 TRERF1Q96PN7 1200 aa7.35□□□□□ -1.23
CDH12-203ENST00000517378 UTRNP46939 3433 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 ZNF646O15015 1829 aaPredicted RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 ZBTB5O15062 677 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 NCK2O43639 380 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 ZEB2O60315 1214 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 ANXA13P27216 316 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 HOXA10P31260 410 aaPredicted RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 RFC4P35249 363 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 IRAK1P51617 712 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 MRPL12P52815 198 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 LRRC41Q15345 812 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 CCDC40Q4G0X9 1142 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 IFT20Q8IY31 132 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 LRRC47Q8N1G4 583 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 CRYGNQ8WXF5 182 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 RPGRQ92834 1020 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 LSM14BQ9BX40 385 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 PLCB1Q9NQ66 1216 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 BMP2KQ9NSY1 1161 aaPredicted RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 TMEM59LQ9UK28 342 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 BHMG1C9JSJ3 638 aaPredicted RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 TRAF5O00463 557 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 EIF3HO15372 352 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDH12-203ENST00000517378 PALMO75781 387 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 BBOX1O75936 387 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 CYP11B2P19099 503 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 CXCR5P32302 372 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 USP11P51784 963 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 SLC12A3P55017 1021 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 UBE2SQ16763 222 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 TDRD12Q587J7 1177 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 DNAJC21Q5F1R6 531 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 TRAPPC3LQ5T215 181 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 C10orf67Q8IYJ2 551 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 PIAS4Q8N2W9 510 aaPredicted RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 TBC1D16Q8TBP0 767 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 SCFD1Q8WVM8 642 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 RBM17Q96I25 401 aaKnown RBP7.34□□□□□ -1.23
CDH12-203ENST00000517378 FGFBP2Q9BYJ0 223 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 FAM107BQ9H098 131 aa7.34□□□□□ -1.23
CDH12-203ENST00000517378 FBXL5Q9UKA1 691 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms