RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 APOBRQ0VD83 1088 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 COASYQ13057 564 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 FZD5Q13467 585 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 SMAD4Q13485 552 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 KCTD2Q14681 263 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 LPIN1Q14693 890 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 WTAPQ15007 396 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CCDC6Q16204 474 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PTGISQ16647 500 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PTPN21Q16825 1174 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 ALDH1L2Q3SY69 923 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 SBK1Q52WX2 424 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 WDR44Q5JSH3 913 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 FAM26DQ5JW98 314 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 MARCH8Q5T0T0 291 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 SLC9C2Q5TAH2 1124 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CEP85Q6P2H3 762 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 NFRKBQ6P4R8 1299 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CNKSR3Q6P9H4 555 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 BTNL9Q6UXG8 535 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 RUFY4Q6ZNE9 571 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 LRRC55Q6ZSA7 311 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 KIAA1211Q6ZU35 1233 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 KCTD1Q719H9 257 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 LRRC8DQ7L1W4 858 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 ERMP1Q7Z2K6 904 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TTC6Q86TZ1 520 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 SERINC5Q86VE9 423 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 FBXO11Q86XK2 927 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CCAR1Q8IX12 1150 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 SLF2Q8IX21 1173 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 ZNF687Q8N1G0 1237 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TMEM57Q8N5G2 664 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 C12orf76Q8N812 135 aaPredicted RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PRPF38AQ8NAV1 312 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CHST13Q8NET6 341 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 FBXO22Q8NEZ5 403 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 ST13P5Q8NFI4 369 aaPredicted RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 OTUD7AQ8TE49 926 aaPredicted RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 BCL7CQ8WUZ0 217 aaPredicted RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 ATOH1Q92858 354 aaPredicted RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 MAP4K1Q92918 833 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CLP1Q92989 425 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 KIFC2Q96AC6 838 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 VTI1AQ96AJ9 217 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 DDX11Q96FC9 970 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 MFSD14AQ96MC6 490 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 RIPOR3Q96MK2 946 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TRERF1Q96PN7 1200 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PCYT2Q99447 389 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 MTG1Q9BT17 334 aaPredicted RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 RPP25Q9BUL9 199 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 APOL5Q9BWW9 433 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 VN1R3Q9BXE9 311 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TSPYL2Q9H2G4 693 aaPredicted RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 RANBP17Q9H2T7 1088 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 RNPEPQ9H4A4 650 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 NSUN3Q9H649 340 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 IGFLR1Q9H665 355 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CWH43Q9H720 699 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CDHR5Q9HBB8 845 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 IL1RAPL2Q9NP60 686 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 HOMER2Q9NSB8 354 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 RNF146Q9NTX7 359 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 MTMR4Q9NYA4 1195 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 NYAP2Q9P242 653 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CLIP2Q9UDT6 1046 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 GTF2IRD1Q9UHL9 959 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 DDX41Q9UJV9 622 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PRR12Q9ULL5 1215 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 WASF3Q9UPY6 502 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CNPY2Q9Y2B0 182 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 EXOC6BQ9Y2D4 811 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 AKAP2Q9Y2D5 859 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 Q9Y3F1 56 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 MRPL42Q9Y6G3 142 aaKnown RBP1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 R4GN57 208 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 NAV3Q8IVL0 2385 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TMEM131Q92545 1883 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PLIN4Q96Q06 1357 aa1.43□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CREBBPQ92793 2442 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PRRC2CQ9Y520 2896 aaKnown RBP1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 SPENQ96T58 3664 aaKnown RBP1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 CELSR2Q9HCU4 2923 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 DCDC2BA2VCK2 349 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TMEM232C9JQI7 657 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 E9PSI1 815 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TAF4O00268 1085 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 GOLIM4O00461 696 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 TLR3O15455 904 aaKnown RBP1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 ZEB2O60315 1214 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 PLA2G6O60733 806 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 LILRB3O75022 631 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 ATP9AO75110 1047 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 SURF6O75683 361 aaKnown RBP1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 DGKIO75912 1065 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 EFEMP2O95967 443 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 F2P00734 622 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 MMP1P03956 469 aa1.42□□□□□ -2.18
RNU4ATAC11P-201ENST00000515939 HLA-DOAP06340 250 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms