RNA–Protein interactions for RNA: ENST00000515820.6

NKX6-1-202, Transcript of NK6 homeobox 1, humanhuman

TSL 3 BASIC

Gene NKX6-1, Length 2,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-202ENST00000515820 COA7Q96BR5 231 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 TANGO6Q9C0B7 1094 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 FAM107BQ9H098 131 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 RBM12Q9NTZ6 932 aaKnown RBP23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 NOL4O94818 638 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 LRRC41Q15345 812 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 HYIQ5T013 277 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 FAM83BQ5T0W9 1011 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 SLF2Q8IX21 1173 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 GLIS3Q8NEA6 775 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 ZFP91Q96JP5 570 aaPredicted RBP23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 PSMB7Q99436 277 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 CD209Q9NNX6 404 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 MTMR4Q9NYA4 1195 aa23.03■■□□□ 1.28
NKX6-1-202ENST00000515820 GAKO14976 1311 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 IL1R1P14778 569 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 ATP2B2Q01814 1243 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 TDRD12Q587J7 1177 aaKnown RBP23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 FAM26FQ5R3K3 315 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 IFT20Q8IY31 132 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 ANKRD13CQ8N6S4 541 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 CAPS2Q9BXY5 557 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 GDF3Q9NR23 364 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 SMARCAL1Q9NZC9 954 aa23.02■■□□□ 1.28
NKX6-1-202ENST00000515820 FRMPD2Q68DX3 1309 aaPredicted RBP23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 GRID2IPA4D2P6 1211 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 TLR2O60603 784 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 HSF2BPO75031 334 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 CLK2P49760 499 aaKnown RBP23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 NAB2Q15742 525 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 CCDC40Q4G0X9 1142 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 TSEN2Q8NCE0 465 aaKnown RBP23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 PPM1EQ8WY54 764 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 HINFPQ9BQA5 517 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 EHD2Q9NZN4 543 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 ATP6V0A2Q9Y487 856 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 TRAF5O00463 557 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 SKOR1P84550 965 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 ECM1Q16610 540 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 EFCAB13Q8IY85 973 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 BMP2KQ9NSY1 1161 aaPredicted RBP23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 PANK4Q9NVE7 773 aa23.01■■□□□ 1.27
NKX6-1-202ENST00000515820 KDM3AQ9Y4C1 1321 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 PNMA6FA0A0J9YX94 578 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 BUB1O43683 1085 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 GCFC2P16383 781 aaKnown RBP23■■□□□ 1.27
NKX6-1-202ENST00000515820 TRIM59Q8IWR1 403 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 HAS1Q92839 578 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 RUFY1Q96T51 708 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 NT5C3AQ9H0P0 336 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 PLEKHA4Q9H4M7 779 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 EFCC1Q9HA90 598 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 NLRC4Q9NPP4 1024 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 DDX25Q9UHL0 483 aaKnown RBP23■■□□□ 1.27
NKX6-1-202ENST00000515820 PCDHGC5Q9Y5F6 944 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 EIF3HO15372 352 aaKnown RBP eCLIP23■■□□□ 1.27
NKX6-1-202ENST00000515820 SLC26A4O43511 780 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 APBA1Q02410 837 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 SLC18A3Q16572 532 aa23■■□□□ 1.27
NKX6-1-202ENST00000515820 GRIN2DO15399 1336 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 IGKV6D-41A0A0C4DH26 115 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 TNNI2P48788 182 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 DDR1Q08345 913 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 ZC3H3Q8IXZ2 948 aaKnown RBP22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 GPR101Q96P66 508 aaPredicted RBP22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 LSM14BQ9BX40 385 aaKnown RBP22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 AIPL1Q9NZN9 384 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 NAP1L1P55209 391 aaKnown RBP22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 GPSM2P81274 684 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 MRPS25P82663 173 aaKnown RBP22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 MREGQ8N565 214 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 PCDHA2Q9Y5H9 948 aa22.99■■□□□ 1.27
NKX6-1-202ENST00000515820 C10orf71Q711Q0 1435 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 ATAD5Q96QE3 1844 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 PALMO75781 387 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 ATP2B4P23634 1241 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 POLR2FP61218 127 aaKnown RBP22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 GABPAQ06546 454 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 PAK2Q13177 524 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 MEI1Q5TIA1 1274 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 CCDC65Q8IXS2 484 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 MS4A14Q96JA4 679 aa22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 NAP1L4Q99733 375 aaKnown RBP22.98■■□□□ 1.27
NKX6-1-202ENST00000515820 CPP00450 1065 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 ERCC3P19447 782 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 TTMPQ5BVD1 217 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 JMJD4Q9H9V9 463 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 FOCADQ5VW36 1801 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 GLI1P08151 1106 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 ZNF543Q08ER8 600 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 GPIHBP1Q8IV16 184 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 TBC1D22AQ8WUA7 517 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 CUL5Q93034 780 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 PCDHA12Q9UN75 941 aa22.97■■□□□ 1.27
NKX6-1-202ENST00000515820 BTNL10A8MVZ5 291 aa22.96■■□□□ 1.27
NKX6-1-202ENST00000515820 CES2O00748 559 aa22.96■■□□□ 1.27
NKX6-1-202ENST00000515820 UFL1O94874 794 aa22.96■■□□□ 1.27
NKX6-1-202ENST00000515820 MRPL12P52815 198 aaKnown RBP22.96■■□□□ 1.27
NKX6-1-202ENST00000515820 GNGT1P63211 74 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms