RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	ARHGAP44	Q17R89	818 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	HABP4	Q5JVS0	413 aa	Known RBP	4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ODR4	Q5SWX8	454 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	IQSEC1	Q6DN90	963 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	C11orf74	Q86VG3	221 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RIOX2	Q8IUF8	465 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RBM12B	Q8IXT5	1001 aa	Known RBP	4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	AGBL5	Q8NDL9	886 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SH3RF2	Q8TEC5	729 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	COG1	Q8WTW3	980 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MYLIP	Q8WY64	445 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MTMR8	Q96EF0	704 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CD244	Q9BZW8	370 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SP110	Q9HB58	689 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RXFP1	Q9HBX9	757 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SLC6A20	Q9NP91	592 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	EMC7	Q9NPA0	242 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CRTAC1	Q9NQ79	661 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	OXSM	Q9NWU1	459 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	DSE	Q9UL01	958 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SIT1	Q9Y3P8	196 aa		4.27	□□□□□ -1.73
CALCOCO2-216	ENST00000509784		H7C1D1	291 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MAN2B1	O00754	1011 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SCD	O00767	359 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SLC27A2	O14975	620 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MARCH6	O60337	910 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ZBTB48	P10074	688 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	GLI4	P10075	376 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	YBX3	P16989	372 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ARL4A	P40617	200 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	IRF9	Q00978	393 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MTMR1	Q13613	665 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NR0B2	Q15466	257 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ZNF792	Q3KQV3	632 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	STEAP3	Q658P3	488 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	FSTL4	Q6MZW2	842 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	OTOP1	Q7RTM1	612 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NECAB2	Q7Z6G3	386 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NLRX1	Q86UT6	975 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	JDP2	Q8WYK2	163 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SMAD5	Q99717	465 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	BOC	Q9BWV1	1114 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RC3H2	Q9HBD1	1191 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CTNND2	Q9UQB3	1225 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RB1CC1	Q8TDY2	1594 aa		4.26	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	HGS	O14964	777 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	HIP1R	O75146	1068 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PARN	O95453	639 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PNLIP	P16233	465 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SLC9A1	P19634	815 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SDHB	P21912	280 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ZNF174	Q15697	407 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CHRNA2	Q15822	529 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CPZ	Q66K79	652 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CREB3L3	Q68CJ9	461 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	HHIPL2	Q6UWX4	724 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NOSTRIN	Q8IVI9	506 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	LILRA2	Q8N149	483 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	CNTD1	Q8N815	330 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	KIAA1958	Q8N8K9	716 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	UHMK1	Q8TAS1	419 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SHISA4	Q96DD7	197 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TRIM8	Q9BZR9	551 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PUS7L	Q9H0K6	701 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	AP5M1	Q9H0R1	490 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SRPK3	Q9UPE1	567 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ATP23	Q9Y6H3	246 aa		4.25	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ZC3H12D	A2A288	527 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	DVL2	O14641	736 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SGSM2	O43147	1006 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MAFK	O60675	156 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ADAM23	O75077	832 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ALDH1L1	O75891	902 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PRKD3	O94806	890 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	LTF	P02788	710 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SLC6A11	P48066	632 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	KIF11	P52732	1056 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	GRIN1	Q05586	938 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TUSC3	Q13454	348 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	TMEM132B	Q14DG7	1078 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SNX17	Q15036	470 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	DDB1	Q16531	1140 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	FIGN	Q5HY92	759 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	EMC4	Q5J8M3	183 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ZMYM1	Q5SVZ6	1142 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	BROX	Q5VW32	411 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	KCTD1	Q719H9	257 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	MILR1	Q7Z6M3	343 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	DCP2	Q8IU60	420 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	PASD1	Q8IV76	773 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RAVER1	Q8IY67	606 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	NLGN4X	Q8N0W4	816 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	EFHB	Q8N7U6	833 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ABHD4	Q8TB40	342 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SEC14L1	Q92503	715 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	SLC5A5	Q92911	643 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	ASPSCR1	Q9BZE9	553 aa		4.24	□□□□□ -1.73
CALCOCO2-216	ENST00000509784	RNF32	Q9H0A6	362 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms