RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 A0A1W2PQD8 194 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 ORC2Q13416 577 aaPredicted RBP10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 SPAG5Q96R06 1193 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 MAGEF1Q9HAY2 307 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 RCOR1Q9UKL0 485 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 AFG3L2Q9Y4W6 797 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 SNCAIPQ9Y6H5 919 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 ADAMTS7Q9UKP4 1686 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 EIF3JO75822 258 aaKnown RBP10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 RPN1P04843 607 aaKnown RBP10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 KRT19P08727 400 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 SSR1P43307 286 aaKnown RBP10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 GNASQ5JWF2 1037 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 TMC6Q7Z403 805 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 NELFBQ8WX92 580 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 SOCS4Q8WXH5 440 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 TBC1D5Q92609 795 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 LXNQ9BS40 222 aa10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 MAP3K20Q9NYL2 800 aaKnown RBP10.48□□□□□ -0.73
GAPVD1-219ENST00000495955 ZSCAN20P17040 1043 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 STAT5BP51692 787 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 PSMC5P62195 406 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 FAM26FQ5R3K3 315 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 PRDM5Q9NQX1 630 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SYNRGQ9UMZ2 1314 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 ESYT2A0FGR8 921 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 FKTNO75072 461 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 YARSP54577 528 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 MAP2K1Q02750 393 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 MUM1L1Q5H9M0 696 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 ANKRD23Q86SG2 305 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 TXLNBQ8N3L3 684 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 GJA10Q969M2 543 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SLC38A10Q9HBR0 1119 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 POTECB2RU33 542 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SLC9C1Q4G0N8 1177 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 XRRA1Q6P2D8 792 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 POTEBQ6S5H4 581 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 MLKLQ8NB16 471 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 EIF2AK1Q9BQI3 630 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SGIP1Q9BQI5 828 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 ATP6V0A4Q9HBG4 840 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 KCNH7Q9NS40 1196 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 LRFN2Q9ULH4 789 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 HNRNPDLO14979 420 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 WDR44Q5JSH3 913 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SLC30A10Q6XR72 485 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 SYTL5Q8TDW5 730 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 RANBP17Q9H2T7 1088 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 DNAJC18Q9H819 358 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 PXMP2Q9NR77 195 aa10.47□□□□□ -0.73
GAPVD1-219ENST00000495955 UBXN1Q04323 297 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 CCDC173Q0VFZ6 552 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 RNF180Q86T96 592 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 GRAMD1CQ8IYS0 662 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 TCP11Q8WWU5 503 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 SEPT1Q8WYJ6 367 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 FAM193BQ96PV7 902 aaPredicted RBP10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 POTEFA5A3E0 1075 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 TNNI1P19237 187 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 APLP1P51693 650 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 NLRP12P59046 1061 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 MYL5Q02045 173 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 FSTL1Q12841 308 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 POTEGQ6S5H5 508 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 KIAA1328Q86T90 577 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 MYPNQ86TC9 1320 aa10.46□□□□□ -0.73
GAPVD1-219ENST00000495955 PP2D1A8MPX8 630 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 E9PMD0 336 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 STAM2O75886 525 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 GAP43P17677 238 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 SFPQP23246 707 aaKnown RBP eCLIP10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 CPT1AP50416 773 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 SPA17Q15506 151 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 RIOX2Q8IUF8 465 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 REM2Q8IYK8 340 aaPredicted RBP10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 ABI1Q8IZP0 508 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 NEK9Q8TD19 979 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 NOC4LQ9BVI4 516 aaKnown RBP10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 ROBO3Q96MS0 1386 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 SFI1A8K8P3 1242 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 ARMCX5Q6P1M9 558 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 CNTNAP1P78357 1384 aa10.46□□□□□ -0.74
GAPVD1-219ENST00000495955 U2AF2P26368 475 aaKnown RBP eCLIP10.45□□□□□ -0.741e-6■■■□□ 15.4
GAPVD1-219ENST00000495955 DGKDQ16760 1214 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 PADI6Q6TGC4 694 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 SLC17A8Q8NDX2 589 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 POMGNT1Q8WZA1 660 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 KATNAL1Q9BW62 490 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 PARVGQ9HBI0 331 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 SPEF2Q9C093 1822 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 MAFGO15525 162 aa10.45□□□□□ -0.74
GAPVD1-219ENST00000495955 AOC2O75106 756 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms