RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 TNPO1Q92973 898 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 VTI1AQ96AJ9 217 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 ZNF775Q96BV0 537 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 PABPC5Q96DU9 382 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 GPATCH3Q96I76 525 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 FGD4Q96M96 766 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 C1QTNF2Q9BXJ5 285 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 SENP6Q9GZR1 1112 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 PCDHGB7Q9Y5F8 929 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 KIAA1217Q5T5P2 1943 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 TNRC18O15417 2968 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 TNFRSF10BO14763 440 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ZBTB24O43167 697 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 LZTS3O60299 673 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 FZD6O60353 706 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 EYA4O95677 639 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 SNAI1O95863 264 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ICAM1P05362 532 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 SRGAP2BP0DMP2 458 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 SNHG28P0DPA3 235 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 TGFB3P10600 412 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 CYP7A1P22680 504 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ERCC5P28715 1186 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ICAM3P32942 547 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ADCYAP1R1P41586 468 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 USP5P45974 858 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ORC1Q13415 861 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 CNGB1Q14028 1251 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 GORABQ5T7V8 394 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 PPP1R26Q5T8A7 1209 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 RNF20Q5VTR2 975 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 PI16Q6UXB8 463 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 RSPO2Q6UXX9 243 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 MCF2L2Q86YR7 1114 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ADHFE1Q8IWW8 467 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 HDAC7Q8WUI4 952 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 PPP2R3CQ969Q6 453 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 MRPL38Q96DV4 380 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 RAD9AQ99638 391 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 PBX4Q9BYU1 374 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 NIF3L1Q9GZT8 377 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 DCP1AQ9NPI6 582 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 PARP2Q9UGN5 583 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 PRR12Q9ULL5 1215 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 SLC4A7Q9Y6M7 1214 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 KDM3AQ9Y4C1 1321 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 NLRC5Q86WI3 1866 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 COL1A2P08123 1366 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 SRGAP3O43295 1099 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 TTLL1O95922 423 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 PDE6AP16499 860 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ADORA1P30542 326 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 TCP10Q12799 353 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 TMEM132BQ14DG7 1078 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 GPATCH4Q5T3I0 446 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 C16orf46Q6P387 395 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 HERC6Q8IVU3 1022 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ETFBKMTQ8IXQ9 262 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 UBALD2Q8IYN6 164 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 CMTR2Q8IYT2 770 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 TMEM87AQ8NBN3 555 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 MYLIPQ8WY64 445 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 NXPE3Q969Y0 559 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 TGS1Q96RS0 853 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ZNF395Q9H8N7 513 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 MRS2Q9HD23 443 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 EGFL7Q9UHF1 273 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ZNF232Q9UNY5 417 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 ATP11BQ9Y2G3 1177 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 MICAL3Q7RTP6 2002 aa3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 MYO5AQ9Y4I1 1855 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-203ENST00000488146 GDF9O60383 454 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 LILRA1O75019 489 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 GDF11O95390 407 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 AMHP03971 560 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 GNAT1P11488 350 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 SELPP16109 830 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 CACNB3P54284 484 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 EHHADHQ08426 723 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 GIT2Q14161 759 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 FSCN1Q16658 493 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 CTC1Q2NKJ3 1217 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 TRIM71Q2Q1W2 868 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 TMEM67Q5HYA8 995 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 NT5DC4Q86YG4 428 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 SIAH1Q8IUQ4 282 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 RGL4Q8IZJ4 473 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 SCFD2Q8WU76 684 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 APPBP2Q92624 585 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 NECTIN4Q96NY8 510 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 LRFN3Q9BTN0 628 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 ALDH8A1Q9H2A2 487 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 PIH1D3Q9NQM4 214 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 BRPF3Q9ULD4 1205 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 POLIQ9UNA4 740 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 LOC730098B7Z3J9 87 aa3.21□□□□□ -1.9
DEPDC1-203ENST00000488146 DCXO43602 365 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms