RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SEC62Q99442 399 aaKnown RBP8.95□□□□□ -0.98
PDPN-205ENST00000487038 PLVAPQ9BX97 442 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 IGFLR1Q9H665 355 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 FAM86C1Q9NVL1 165 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 ANAPC4Q9UJX5 808 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 CEP250Q9BV73 2442 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.94□□□□□ -0.98
PDPN-205ENST00000487038 LOC730098B7Z3J9 87 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 GRM6O15303 877 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 CSPG5O95196 566 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 EYA4O95677 639 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 HOXD8P13378 290 aaPredicted RBP8.94□□□□□ -0.98
PDPN-205ENST00000487038 EIF2AK2P19525 551 aaKnown RBP8.94□□□□□ -0.98
PDPN-205ENST00000487038 BMPR1AP36894 532 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 ZNF200P98182 395 aaPredicted RBP8.94□□□□□ -0.98
PDPN-205ENST00000487038 CDC37Q16543 378 aaPredicted RBP8.94□□□□□ -0.98
PDPN-205ENST00000487038 RRP12Q5JTH9 1297 aaKnown RBP8.94□□□□□ -0.98
PDPN-205ENST00000487038 SMRP1Q8NCR6 262 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 SYTL5Q8TDW5 730 aaPredicted RBP8.94□□□□□ -0.98
PDPN-205ENST00000487038 P2RX5Q93086 422 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 SPATA33Q96N06 139 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 TTC14Q96N46 770 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 TAAR1Q96RJ0 339 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 TCP11L1Q9NUJ3 509 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 TTC41PQ6P2S7 1318 aa8.94□□□□□ -0.98
PDPN-205ENST00000487038 DMXL1Q9Y485 3027 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 H3BRB1 525 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 NOP56O00567 594 aaKnown RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 LINC01565O15544 149 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 KDM4AO75164 1064 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 SRGAP2BP0DMP2 458 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 SMIM10L2AP0DMW4 78 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 SMIM10L2BP0DMW5 78 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 SNHG28P0DPA3 235 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 HSPD1P10809 573 aaKnown RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 COASYQ13057 564 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 ADAM15Q13444 863 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 BTG3Q14201 252 aaPredicted RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 CBX2Q14781 532 aaPredicted RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 HSDL1Q3SXM5 330 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 NAALADL2Q58DX5 795 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 ZMYM1Q5SVZ6 1142 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 MYSM1Q5VVJ2 828 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 TSHZ3Q63HK5 1081 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 ZBTB33Q86T24 672 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 MIER1Q8N108 512 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 EFHBQ8N7U6 833 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 CLP1Q92989 425 aaKnown RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 MSLNLQ96KJ4 702 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 PHF7Q9BWX1 381 aaPredicted RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 TUT1Q9H6E5 874 aaKnown RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 MLXIPQ9HAP2 919 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 INCENPQ9NQS7 918 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 PXMP2Q9NR77 195 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 ZNF215Q9UL58 517 aaPredicted RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 MRPL11Q9Y3B7 192 aaKnown RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 TTC3P53804 2025 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 EP300Q09472 2414 aaPredicted RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 ACACBO00763 2458 aa8.93□□□□□ -0.98
PDPN-205ENST00000487038 KMT2BQ9UMN6 2715 aaPredicted RBP8.93□□□□□ -0.98
PDPN-205ENST00000487038 FNDC1Q4ZHG4 1894 aaPredicted RBP8.92□□□□□ -0.98
PDPN-205ENST00000487038 PROB1E7EW31 1015 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 TREHO43280 583 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 DHX16O60231 1041 aaKnown RBP8.92□□□□□ -0.98
PDPN-205ENST00000487038 GGPS1O95749 300 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 NR3C2P08235 984 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 FGRP09769 529 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 TGFB3P10600 412 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 PCP11498 1178 aaKnown RBP8.92□□□□□ -0.98
PDPN-205ENST00000487038 AVPR2P30518 371 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 HOXC8P31273 242 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 VCPP55072 806 aaKnown RBP8.92□□□□□ -0.98
PDPN-205ENST00000487038 RRP1P56182 461 aaKnown RBP8.92□□□□□ -0.98
PDPN-205ENST00000487038 CELF3Q5SZQ8 465 aaKnown RBP8.92□□□□□ -0.98
PDPN-205ENST00000487038 MCTP2Q6DN12 878 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 MAP3K20Q9NYL2 800 aaKnown RBP8.92□□□□□ -0.98
PDPN-205ENST00000487038 COL20A1Q9P218 1284 aa8.92□□□□□ -0.98
PDPN-205ENST00000487038 CHD6Q8TD26 2715 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 ZMYM6O95789 1325 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 H0Y858 1186 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 GALR2O43603 387 aaPredicted RBP8.91□□□□□ -0.98
PDPN-205ENST00000487038 CFBP00751 764 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 LGALS2P05162 132 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 GOLGA8HP0CJ92 632 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 MYCLP12524 364 aaPredicted RBP8.91□□□□□ -0.98
PDPN-205ENST00000487038 ATF7P17544 494 aaPredicted RBP8.91□□□□□ -0.98
PDPN-205ENST00000487038 UBA1P22314 1058 aaKnown RBP8.91□□□□□ -0.98
PDPN-205ENST00000487038 ICAM3P32942 547 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 GTF2F1P35269 517 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDPN-205ENST00000487038 NT5C2P49902 561 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 HNRNPUQ00839 825 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDPN-205ENST00000487038 HIC1Q14526 733 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 PTPN21Q16825 1174 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 GNPTABQ3T906 1256 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 RSPH3Q86UC2 560 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 ASIC4Q96FT7 647 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 RPGRIP1Q96KN7 1286 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 C16orf70Q9BSU1 422 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 USP26Q9BXU7 913 aa8.91□□□□□ -0.98
PDPN-205ENST00000487038 RNPEPQ9H4A4 650 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms