RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SPPL2CQ8IUH8 684 aa8.16□□□□□ -1.1
VPS50-212ENST00000476413 CNTD1Q8N815 330 aa8.16□□□□□ -1.1
VPS50-212ENST00000476413 UHMK1Q8TAS1 419 aaKnown RBP8.16□□□□□ -1.1
VPS50-212ENST00000476413 C19orf44Q9H6X5 657 aa8.16□□□□□ -1.1
VPS50-212ENST00000476413 VTA1Q9NP79 307 aa8.16□□□□□ -1.1
VPS50-212ENST00000476413 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
VPS50-212ENST00000476413 SLC12A8A0AV02 714 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 K7ESF4 209 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 TRHRP34981 398 aaPredicted RBP8.15□□□□□ -1.1
VPS50-212ENST00000476413 GDNFP39905 211 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 KPNA1P52294 538 aaPredicted RBP8.15□□□□□ -1.1
VPS50-212ENST00000476413 IRF9Q00978 393 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 TTF1Q15361 905 aaPredicted RBP8.15□□□□□ -1.1
VPS50-212ENST00000476413 SEC23AQ15436 765 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 OXR1Q8N573 874 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 EFHBQ8N7U6 833 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 CHPF2Q9P2E5 772 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 TELO2Q9Y4R8 837 aa8.15□□□□□ -1.1
VPS50-212ENST00000476413 GABRDO14764 452 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 TADA3O75528 432 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 RNASE1P07998 156 aaKnown RBP8.14□□□□□ -1.11
VPS50-212ENST00000476413 SLC6A11P48066 632 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 ERVK-21P61565 698 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 MCL1Q07820 350 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 ITKQ08881 620 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 FIGNQ5HY92 759 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 CBARPQ8N350 705 aaPredicted RBP8.14□□□□□ -1.11
VPS50-212ENST00000476413 CLRN3Q8NCR9 226 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 USP33Q8TEY7 942 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 MTMR8Q96EF0 704 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 CD244Q9BZW8 370 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 TRHDEQ9UKU6 1024 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 DSEQ9UL01 958 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 B3GALT1Q9Y5Z6 326 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 EID1Q9Y6B2 187 aa8.14□□□□□ -1.11
VPS50-212ENST00000476413 KRT37O76014 449 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 GALK1P51570 392 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 OCRLQ01968 901 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 CPZQ66K79 652 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 DLG3Q92796 817 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 CCDC120Q96HB5 630 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 ANGEL1Q9UNK9 670 aaKnown RBP8.13□□□□□ -1.11
VPS50-212ENST00000476413 CTNND2Q9UQB3 1225 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 SPO11Q9Y5K1 396 aa8.13□□□□□ -1.11
VPS50-212ENST00000476413 A0A1W2PQ27 194 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 A0A1W2PQ64 194 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 A0A1W2PQC6 194 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 A0A1W2PQD8 194 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 SLC9A1P19634 815 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 EPHA5P54756 1037 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 CYP4F8P98187 520 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 PLCL1Q15111 1095 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 INAVAQ3KP66 663 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 SYDE2Q5VT97 1194 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 STEAP3Q658P3 488 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 CYP4F22Q6NT55 531 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 RBM12BQ8IXT5 1001 aaKnown RBP8.12□□□□□ -1.11
VPS50-212ENST00000476413 KIAA1958Q8N8K9 716 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 SLC5A5Q92911 643 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 ELF4Q99607 663 aaPredicted RBP8.12□□□□□ -1.11
VPS50-212ENST00000476413 TNFRSF12AQ9NP84 129 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 SIT1Q9Y3P8 196 aa8.12□□□□□ -1.11
VPS50-212ENST00000476413 H7C1D1 291 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 KRIT1O00522 736 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 SLC27A2O14975 620 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 SGSM2O43147 1006 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 SRGAP3O43295 1099 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 CLASP2O75122 1294 aaKnown RBP8.11□□□□□ -1.11
VPS50-212ENST00000476413 ULK1O75385 1050 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 LTFP02788 710 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 NEK2P51955 445 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 SMAD3P84022 425 aaKnown RBP8.11□□□□□ -1.11
VPS50-212ENST00000476413 TERF2Q15554 542 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
VPS50-212ENST00000476413 NFE2Q16621 373 aaPredicted RBP8.11□□□□□ -1.11
VPS50-212ENST00000476413 BICRALQ6AI39 1079 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 IQSEC1Q6DN90 963 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 KCTD1Q719H9 257 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 C11orf74Q86VG3 221 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 LILRA2Q8N149 483 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 NETO2Q8NC67 525 aa8.11□□□□□ -1.11
VPS50-212ENST00000476413 SMAD5Q99717 465 aaKnown RBP8.11□□□□□ -1.11
VPS50-212ENST00000476413 PDGFDQ9GZP0 370 aaPredicted RBP8.11□□□□□ -1.11
VPS50-212ENST00000476413 TNKSO95271 1327 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.1□□□□□ -1.11
VPS50-212ENST00000476413 FAM90A27PA6NNH2 459 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 SCDO00767 359 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 DBHP09172 617 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 PNLIPP16233 465 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 EPHB1P54762 984 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 PHC1P78364 1004 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 DDB1Q16531 1140 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 ZNF792Q3KQV3 632 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 BROXQ5VW32 411 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 SEC14L1Q92503 715 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 YIPF4Q9BSR8 244 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 MENTQ9BUN1 341 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 MS4A5Q9H3V2 200 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 SMOC1Q9H4F8 434 aa8.1□□□□□ -1.11
VPS50-212ENST00000476413 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms