RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 KIAA0753Q2KHM9 967 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 NFRKBQ6P4R8 1299 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 METTL7BQ6UX53 244 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
BRD9-203ENST00000475706 CYP2W1Q8TAV3 490 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 IL17RAQ96F46 866 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 AIFM3Q96NN9 605 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 SENP7Q9BQF6 1050 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 KATNAL1Q9BW62 490 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 C22orf23Q9BZE7 217 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 SH3GLB2Q9NR46 395 aa13.23□□□□□ -0.29
BRD9-203ENST00000475706 MAFGO15525 162 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 LARGE1O95461 756 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 LGALS2P05162 132 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 CCL23P55773 120 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 ARHGAP4P98171 946 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
BRD9-203ENST00000475706 PTGISQ16647 500 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 ME3Q16798 604 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 CEP55Q53EZ4 464 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 MCTP2Q6DN12 878 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 MFSD5Q6N075 450 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 GPR20Q99678 358 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 KCNH7Q9NS40 1196 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 HDAC6Q9UBN7 1215 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 MYO9BQ13459 2157 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
BRD9-203ENST00000475706 UMODL1Q5DID0 1318 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 ARP10275 920 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
BRD9-203ENST00000475706 KCNA2P16389 499 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
BRD9-203ENST00000475706 PPIGQ13427 754 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■□□ 15.3
BRD9-203ENST00000475706 SHHQ15465 462 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 GDF6Q6KF10 455 aaPredicted RBP13.21□□□□□ -0.29
BRD9-203ENST00000475706 PLA2G4DQ86XP0 818 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 UIMC1Q96RL1 719 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 SDF4Q9BRK5 362 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 NOC4LQ9BVI4 516 aaKnown RBP13.21□□□□□ -0.29
BRD9-203ENST00000475706 UPF2Q9HAU5 1272 aaKnown RBP13.21□□□□□ -0.29
BRD9-203ENST00000475706 ORC3Q9UBD5 711 aaPredicted RBP13.21□□□□□ -0.29
BRD9-203ENST00000475706 PCDHA4Q9UN74 947 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 TELO2Q9Y4R8 837 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 EVPLQ92817 2033 aa13.21□□□□□ -0.29
BRD9-203ENST00000475706 H3BRB1 525 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 DDX39AO00148 427 aaKnown RBP13.2□□□□□ -0.3
BRD9-203ENST00000475706 HAS3O00219 553 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 CTDNEP1O95476 244 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 F2P00734 622 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 ACRP10323 421 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 CSF2RAP15509 400 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 XBP1P17861 261 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 EPHB4P54760 987 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 BLIDQ8IZY5 108 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 RETREG2Q8NC44 543 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 SEPT1Q8WYJ6 367 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 GTF3C6Q969F1 213 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 C16orf70Q9BSU1 422 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 TUT1Q9H6E5 874 aaKnown RBP13.2□□□□□ -0.3
BRD9-203ENST00000475706 GTF2IRD1Q9UHL9 959 aa13.2□□□□□ -0.3
BRD9-203ENST00000475706 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 STK36Q9NRP7 1315 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 MEIS1O00470 390 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 SOX1O00570 391 aaPredicted RBP13.19□□□□□ -0.3
BRD9-203ENST00000475706 CYP3A4P08684 503 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
BRD9-203ENST00000475706 FOSBP53539 338 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 SESTD1Q86VW0 696 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 TRIM50Q86XT4 487 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 WASF1Q92558 559 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 SCLYQ96I15 445 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 AGO4Q9HCK5 861 aaKnown RBP13.19□□□□□ -0.3
BRD9-203ENST00000475706 JPH1Q9HDC5 661 aaPredicted RBP13.19□□□□□ -0.3
BRD9-203ENST00000475706 SLC9A2Q9UBY0 812 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 ZNF215Q9UL58 517 aaPredicted RBP13.19□□□□□ -0.3
BRD9-203ENST00000475706 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
BRD9-203ENST00000475706 C17orf102A2RUQ5 167 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 ZNF200P98182 395 aaPredicted RBP13.18□□□□□ -0.3
BRD9-203ENST00000475706 BFSP2Q13515 415 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 PRR16Q569H4 304 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 GLG1Q92896 1179 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 LRCH3Q96II8 777 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 RNPC3Q96LT9 517 aaKnown RBP13.18□□□□□ -0.3
BRD9-203ENST00000475706 KIF2CQ99661 725 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.32e-10■■□□□ 12.7
BRD9-203ENST00000475706 WNT8AQ9H1J5 351 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 IL23AQ9NPF7 189 aa13.18□□□□□ -0.3
BRD9-203ENST00000475706 GJB4Q9NTQ9 266 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms