RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ANKRD1Q15327 319 aa27.45■■□□□ 1.98
CPNE1-223ENST00000475146 REXO1Q8N1G1 1221 aaKnown RBP27.45■■□□□ 1.98
CPNE1-223ENST00000475146 RNPC3Q96LT9 517 aaKnown RBP27.45■■□□□ 1.98
CPNE1-223ENST00000475146 SLKQ9H2G2 1235 aaPredicted RBP27.45■■□□□ 1.98
CPNE1-223ENST00000475146 DOCK5Q9H7D0 1870 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 SREBF1P36956 1147 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 AK2P54819 239 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 PTGISQ16647 500 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 SESTD1Q86VW0 696 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 GPR20Q99678 358 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 MXRA8Q9BRK3 442 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 HDAC6Q9UBN7 1215 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 TPCN1Q9ULQ1 816 aa27.44■■□□□ 1.98
CPNE1-223ENST00000475146 HAS3O00219 553 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 ATP9AO75110 1047 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 LGALS2P05162 132 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 KCNA2P16389 499 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 ZNF76P36508 570 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 GDF6Q6KF10 455 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-223ENST00000475146 BICD2Q8TD16 824 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 IL17RAQ96F46 866 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 C16orf70Q9BSU1 422 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 WNT8AQ9H1J5 351 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 GTF2IRD1Q9UHL9 959 aa27.43■■□□□ 1.98
CPNE1-223ENST00000475146 ADAMTS3O15072 1205 aa27.42■■□□□ 1.98
CPNE1-223ENST00000475146 DEXIO95424 95 aa27.42■■□□□ 1.98
CPNE1-223ENST00000475146 ARHGAP4P98171 946 aa27.42■■□□□ 1.98
CPNE1-223ENST00000475146 SCRN1Q12765 414 aa27.42■■□□□ 1.98
CPNE1-223ENST00000475146 UTP14CQ5TAP6 766 aaKnown RBP27.42■■□□□ 1.98
CPNE1-223ENST00000475146 MCTP2Q6DN12 878 aa27.42■■□□□ 1.98
CPNE1-223ENST00000475146 MAFGO15525 162 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 CDKL5O76039 1030 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 ACRP10323 421 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 NLRP5P59047 1200 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 C8orf34Q49A92 452 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 CEP55Q53EZ4 464 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 CYP2W1Q8TAV3 490 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 RASGRP4Q8TDF6 673 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.41■■□□□ 1.98
CPNE1-223ENST00000475146 SH3GLB2Q9NR46 395 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 TELO2Q9Y4R8 837 aa27.41■■□□□ 1.98
CPNE1-223ENST00000475146 H3BRB1 525 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 PFKFB2O60825 505 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 NEK4P51957 841 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 TRIM50Q86XT4 487 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 RETREG2Q8NC44 543 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 SCLYQ96I15 445 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 TUT1Q9H6E5 874 aaKnown RBP27.4■■□□□ 1.98
CPNE1-223ENST00000475146 IL23AQ9NPF7 189 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 KCNH7Q9NS40 1196 aa27.4■■□□□ 1.98
CPNE1-223ENST00000475146 BFSP2Q13515 415 aa27.39■■□□□ 1.98
CPNE1-223ENST00000475146 PSRC1Q6PGN9 363 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-223ENST00000475146 ZNF215Q9UL58 517 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-223ENST00000475146 ARP10275 920 aa27.38■■□□□ 1.97
CPNE1-223ENST00000475146 TCF7P36402 384 aaPredicted RBP27.38■■□□□ 1.97
CPNE1-223ENST00000475146 TMEM240Q5SV17 173 aa27.38■■□□□ 1.97
CPNE1-223ENST00000475146 ZNF365Q70YC5 407 aa27.38■■□□□ 1.97
CPNE1-223ENST00000475146 C16orf59Q7L2K0 433 aa27.38■■□□□ 1.97
CPNE1-223ENST00000475146 CCDC155Q8N6L0 562 aa27.38■■□□□ 1.97
CPNE1-223ENST00000475146 SDF4Q9BRK5 362 aa27.38■■□□□ 1.97
CPNE1-223ENST00000475146 JPH1Q9HDC5 661 aaPredicted RBP27.38■■□□□ 1.97
CPNE1-223ENST00000475146 PITPNM1O00562 1244 aa27.37■■□□□ 1.97
CPNE1-223ENST00000475146 SEPT1Q8WYJ6 367 aa27.37■■□□□ 1.97
CPNE1-223ENST00000475146 AIFM3Q96NN9 605 aa27.37■■□□□ 1.97
CPNE1-223ENST00000475146 CTAGE1Q96RT6 745 aa27.37■■□□□ 1.97
CPNE1-223ENST00000475146 AGO4Q9HCK5 861 aaKnown RBP27.37■■□□□ 1.97
CPNE1-223ENST00000475146 MEIS1O00470 390 aa27.36■■□□□ 1.97
CPNE1-223ENST00000475146 SMIM10L2AP0DMW4 78 aa27.36■■□□□ 1.97
CPNE1-223ENST00000475146 SMIM10L2BP0DMW5 78 aa27.36■■□□□ 1.97
CPNE1-223ENST00000475146 ZNF200P98182 395 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-223ENST00000475146 PLA2G4DQ86XP0 818 aa27.36■■□□□ 1.97
CPNE1-223ENST00000475146 RPUSD2Q8IZ73 545 aaKnown RBP27.36■■□□□ 1.97
CPNE1-223ENST00000475146 CAGE1Q8TC20 777 aa27.36■■□□□ 1.97
CPNE1-223ENST00000475146 FAM86B1E9PN63 330 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 CYP3A4P08684 503 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 FAM86B2P0C5J1 330 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 NIPA1Q7RTP0 329 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 NECAB1Q8N987 351 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 CRYGNQ8WXF5 182 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 SLC9A2Q9UBY0 812 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 PCDHA4Q9UN74 947 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 NFASCO94856 1347 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 STK36Q9NRP7 1315 aa27.35■■□□□ 1.97
CPNE1-223ENST00000475146 GSTTP1A0A1W2PQM5 241 aa27.34■■□□□ 1.97
CPNE1-223ENST00000475146 C17orf102A2RUQ5 167 aa27.34■■□□□ 1.97
CPNE1-223ENST00000475146 DTNBO60941 627 aa27.34■■□□□ 1.97
CPNE1-223ENST00000475146 FGBP02675 491 aa27.34■■□□□ 1.97
CPNE1-223ENST00000475146 ME3Q16798 604 aa27.34■■□□□ 1.97
CPNE1-223ENST00000475146 GPR153Q6NV75 609 aa27.34■■□□□ 1.97
CPNE1-223ENST00000475146 DEFB128Q7Z7B8 93 aa27.34■■□□□ 1.97
CPNE1-223ENST00000475146 DHX38Q92620 1227 aaKnown RBP27.34■■□□□ 1.97
CPNE1-223ENST00000475146 LARGE1O95461 756 aa27.33■■□□□ 1.97
CPNE1-223ENST00000475146 IQCF3P0C7M6 154 aa27.33■■□□□ 1.97
CPNE1-223ENST00000475146 PTK7Q13308 1070 aa27.33■■□□□ 1.97
CPNE1-223ENST00000475146 ITGB3BPQ13352 177 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-223ENST00000475146 HIC1Q14526 733 aa27.33■■□□□ 1.97
CPNE1-223ENST00000475146 AFAP1L1Q8TED9 768 aa27.33■■□□□ 1.97
CPNE1-223ENST00000475146 GLG1Q92896 1179 aa27.33■■□□□ 1.97
CPNE1-223ENST00000475146 MTIF3Q9H2K0 278 aaKnown RBP27.33■■□□□ 1.97
CPNE1-223ENST00000475146 TANC1Q9C0D5 1861 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms