RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 RNF10Q8N5U6 811 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 CENPHQ9H3R5 247 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 CEP72Q9P209 647 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 COL4A3BPQ9Y5P4 624 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 SERPING1P05155 500 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 COASYQ13057 564 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 PTGISQ16647 500 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 KIAA0753Q2KHM9 967 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 ZCWPW2Q504Y3 356 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 CEP85LQ5SZL2 805 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 CNPY4Q8N129 248 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 EYA3Q99504 573 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 EPN3Q9H201 632 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 SEC63Q9UGP8 760 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 NPHP3-ACAD11A0A0J9YXS1 232 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 MNAT1P51948 309 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 CEP95Q96GE4 821 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 STK17AQ9UEE5 414 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 ATP6V0A2Q9Y487 856 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 ABCB11O95342 1321 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 MEFVO15553 781 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 PPP1R37O75864 691 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 SSBP05455 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 ECHS1P30084 290 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 MYOCDQ8IZQ8 938 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 OTUD6BQ8N6M0 293 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 PRPF38AQ8NAV1 312 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 DNAJC19Q96DA6 116 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 ATP6V1G3Q96LB4 118 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 TSG101Q99816 390 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 NEUROG2Q9H2A3 272 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 PCDHGC5Q9Y5F6 944 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 FGFR1OPO95684 399 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 ACTN1P12814 892 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 CDK8P49336 464 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 SLC18A3Q16572 532 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 UBE2SQ16763 222 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 CLEC10AQ8IUN9 316 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 USP38Q8NB14 1042 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 MYCBPAPQ8TBZ2 947 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 TSKSQ9UJT2 592 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 IRS2Q9Y4H2 1338 aa12.91□□□□□ -0.34
PDZRN3-203ENST00000462146 FAM170AA1A519 330 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 KCNK3O14649 394 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 BACH1O14867 736 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 CDC37Q16543 378 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 NLRP14Q86W24 1093 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 MREGQ8N565 214 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 CCT8L2Q96SF2 557 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 AP1M1Q9BXS5 423 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 YY1AP1Q9H869 796 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 LRRC4CQ9HCJ2 640 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 PPANQ9NQ55 473 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 E7EVH7 732 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 DDB1Q16531 1140 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 TMEM266Q2M3C6 531 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 TMEM119Q4V9L6 283 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 RNF187Q5TA31 235 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 B4GALNT4Q76KP1 1039 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 LZTS2Q9BRK4 669 aa12.9□□□□□ -0.34
PDZRN3-203ENST00000462146 E9PMD0 336 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 H0YHG0 523 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 FLT3P36888 993 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 HSD17B3P37058 310 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 TNNI2P48788 182 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 EIF6P56537 245 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 FKBP3Q00688 224 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 KLHL30Q0D2K2 578 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 KRT79Q5XKE5 535 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 CD302Q8IX05 232 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 GPATCH11Q8N954 259 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 PANK4Q9NVE7 773 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 MYBP10242 640 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 IFT88Q13099 833 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 SPRED3Q2MJR0 410 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 FAM26FQ5R3K3 315 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 RIC8AQ9NPQ8 531 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 RNF14Q9UBS8 474 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 TMOD1P28289 359 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 HSPA9P38646 679 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 LRRC47Q8N1G4 583 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 CEP89Q96ST8 783 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms