RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 SNHG28P0DPA3 235 aa17.99■□□□□ 0.47
BRF1-206ENST00000446501 TRIM21P19474 475 aaKnown RBP17.99■□□□□ 0.47
BRF1-206ENST00000446501 PAPD7Q5XG87 772 aaKnown RBP17.99■□□□□ 0.47
BRF1-206ENST00000446501 SMCR8Q8TEV9 937 aaPredicted RBP17.99■□□□□ 0.47
BRF1-206ENST00000446501 C7orf25Q9BPX7 421 aa17.99■□□□□ 0.47
BRF1-206ENST00000446501 CCNE1P24864 410 aa17.98■□□□□ 0.47
BRF1-206ENST00000446501 EEF1GP26641 437 aaKnown RBP17.98■□□□□ 0.47
BRF1-206ENST00000446501 TTMPQ5BVD1 217 aa17.98■□□□□ 0.47
BRF1-206ENST00000446501 SV2BQ7L1I2 683 aa17.98■□□□□ 0.47
BRF1-206ENST00000446501 ZSCAN29Q8IWY8 852 aaPredicted RBP17.98■□□□□ 0.47
BRF1-206ENST00000446501 TSEN2Q8NCE0 465 aaKnown RBP17.98■□□□□ 0.47
BRF1-206ENST00000446501 KRT86O43790 486 aa17.98■□□□□ 0.47
BRF1-206ENST00000446501 SSBP05455 408 aaKnown RBP eCLIP17.98■□□□□ 0.47
BRF1-206ENST00000446501 CXCR5P32302 372 aa17.98■□□□□ 0.47
BRF1-206ENST00000446501 AENQ8WTP8 325 aaKnown RBP17.98■□□□□ 0.47
BRF1-206ENST00000446501 TEKT1Q969V4 418 aa17.98■□□□□ 0.47
BRF1-206ENST00000446501 DHTKD1Q96HY7 919 aaPredicted RBP17.98■□□□□ 0.47
BRF1-206ENST00000446501 DDTLA6NHG4 134 aaPredicted RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 GOLGA8KD6RF30 607 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 CLGNO14967 610 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 MARCH6O60337 910 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 KRT14P02533 472 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 SCP2P22307 547 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 LARP4BQ92615 738 aaKnown RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 NOC4LQ9BVI4 516 aaKnown RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 ESYT2A0FGR8 921 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 OPA1O60313 960 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 ECM2O94769 699 aaPredicted RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 CRKP46108 304 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 GUCY1A3Q02108 690 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 B4GALNT4Q76KP1 1039 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 EHD2Q9NZN4 543 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 TBC1D7Q9P0N9 293 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 ADAMTSL1Q8N6G6 1762 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 HSF2BPO75031 334 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 MYL1P05976 194 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 ACTN3Q08043 901 aaPredicted RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 HAS1Q92839 578 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 CCDC47Q96A33 483 aaKnown RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 RPGRIP1Q96KN7 1286 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 CUEDC2Q9H467 287 aa17.97■□□□□ 0.47
BRF1-206ENST00000446501 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
BRF1-206ENST00000446501 TRIM14Q14142 442 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 MIIPQ5JXC2 388 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 SH3GL2Q99962 352 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 MEFVO15553 781 aaPredicted RBP17.96■□□□□ 0.47
BRF1-206ENST00000446501 AMPD3Q01432 767 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 APBA1Q02410 837 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 DDX12PQ92771 950 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 CAPN11Q9UMQ6 739 aa17.96■□□□□ 0.47
BRF1-206ENST00000446501 EPHB6O15197 1021 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 GDF11O95390 407 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 PLEKP08567 350 aaPredicted RBP17.95■□□□□ 0.46
BRF1-206ENST00000446501 EEF2P13639 858 aaKnown RBP17.95■□□□□ 0.46
BRF1-206ENST00000446501 NPR1P16066 1061 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 DNM2P50570 870 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 TMEM266Q2M3C6 531 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 CCDC155Q8N6L0 562 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 RIC8AQ9NPQ8 531 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 PLIN4Q96Q06 1357 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 HLA-DOAP06340 250 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 FNTAP49354 379 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 SEC24CP53992 1094 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 KRT83P78385 493 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 NNTQ13423 1086 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 FGFBP2Q9BYJ0 223 aa17.95■□□□□ 0.46
BRF1-206ENST00000446501 FAM207AQ9NSI2 230 aaPredicted RBP17.95■□□□□ 0.46
BRF1-206ENST00000446501 ZBTB5O15062 677 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 IQCEQ6IPM2 695 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 CNNM4Q6P4Q7 775 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 CEP57Q86XR8 500 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 CUL5Q93034 780 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 ZKSCAN4Q969J2 545 aaPredicted RBP17.94■□□□□ 0.46
BRF1-206ENST00000446501 DNAJC7Q99615 494 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 KANSL2Q9H9L4 492 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 NPHP3-ACAD11A0A0J9YXS1 232 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 A0A1W2PQC6 194 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 STAT3P40763 770 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 FXR2P51116 673 aaKnown RBP eCLIP17.94■□□□□ 0.46
BRF1-206ENST00000446501 IFT88Q13099 833 aa17.94■□□□□ 0.46
BRF1-206ENST00000446501 BICDL2A1A5D9 508 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 SEPT2Q15019 361 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 QRICH1Q2TAL8 776 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 SH3BP5LQ7L8J4 393 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 KRT26Q7Z3Y9 468 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 EHBP1Q8NDI1 1231 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 RAD54LQ92698 747 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 N4BP2L2Q92802 583 aaPredicted RBP17.93■□□□□ 0.46
BRF1-206ENST00000446501 RNPC3Q96LT9 517 aaKnown RBP17.93■□□□□ 0.46
BRF1-206ENST00000446501 MAGEF1Q9HAY2 307 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 E9PMD0 336 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 SLC1A4P43007 532 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 NLGN1Q8N2Q7 840 aa17.93■□□□□ 0.46
BRF1-206ENST00000446501 ZIM3Q96PE6 472 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms