RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 KCNMA1Q12791 1236 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 LACTB2Q53H82 288 aaPredicted RBP15.31■□□□□ 0.04
VPS52-212ENST00000445902 SFMBT2Q5VUG0 894 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 GIGYF2Q6Y7W6 1299 aaKnown RBP15.31■□□□□ 0.04
VPS52-212ENST00000445902 SELENOSQ9BQE4 189 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 CCSER1Q9C0I3 900 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 TCP11L1Q9NUJ3 509 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 PCDHA4Q9UN74 947 aa15.31■□□□□ 0.04
VPS52-212ENST00000445902 EME2A4GXA9 379 aaPredicted RBP15.3■□□□□ 0.04
VPS52-212ENST00000445902 C5orf60A6NFR6 353 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 ORC4O43929 436 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 DHX9Q08211 1270 aaKnown RBP15.3■□□□□ 0.04
VPS52-212ENST00000445902 BIRC3Q13489 604 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 LETM2Q2VYF4 491 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 HEATR3Q7Z4Q2 680 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 CCDC63Q8NA47 563 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 MAGEC3Q8TD91 643 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 PCDHA6Q9UN73 950 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 PCDHA8Q9Y5H6 950 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 WTIPA6NIX2 430 aaPredicted RBP15.3■□□□□ 0.04
VPS52-212ENST00000445902 PPIP5K2O43314 1243 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 DNAJC8O75937 253 aaPredicted RBP15.3■□□□□ 0.04
VPS52-212ENST00000445902 CALML3P27482 149 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 BIRC2Q13490 618 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 RPS6KA1Q15418 735 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 CNNM4Q6P4Q7 775 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 ZCRB1Q8TBF4 217 aaKnown RBP15.3■□□□□ 0.04
VPS52-212ENST00000445902 CHMP6Q96FZ7 201 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 LSM14BQ9BX40 385 aaKnown RBP15.3■□□□□ 0.04
VPS52-212ENST00000445902 KIF9Q9HAQ2 790 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 TRPM3Q9HCF6 1732 aaPredicted RBP15.3■□□□□ 0.04
VPS52-212ENST00000445902 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 CCT8L1PA6NM43 557 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 ANP32DO95626 131 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 MYL1P05976 194 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 MYBP10242 640 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 FAM83BQ5T0W9 1011 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 CENPPQ6IPU0 288 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 CCDC197Q8NCU1 140 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 PSMD1Q99460 953 aa15.3■□□□□ 0.04
VPS52-212ENST00000445902 MROH5Q6ZUA9 1318 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 TLDC2A0PJX2 215 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 CCNT1O60563 726 aaKnown RBP15.29■□□□□ 0.04
VPS52-212ENST00000445902 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
VPS52-212ENST00000445902 XPO6Q96QU8 1125 aaKnown RBP15.29■□□□□ 0.04
VPS52-212ENST00000445902 MTFR1LQ9H019 292 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 KDM4CQ9H3R0 1056 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 ANAPC4Q9UJX5 808 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 UBR2Q8IWV8 1755 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 CCDC88AQ3V6T2 1871 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 SSU72P8A0A1W2PR75 194 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 TTI1O43156 1089 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 PDE8AO60658 829 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 CAND2O75155 1236 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 CYP2D6P10635 497 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 CUL1Q13616 776 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 PCDHGC5Q9Y5F6 944 aa15.29■□□□□ 0.04
VPS52-212ENST00000445902 C3orf20Q8ND61 904 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 PRCCQ92733 491 aaPredicted RBP15.28■□□□□ 0.04
VPS52-212ENST00000445902 C7orf25Q9BPX7 421 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 CPVLQ9H3G5 476 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 PANK4Q9NVE7 773 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 ASAP1Q9ULH1 1129 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 KRIT1O00522 736 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 NOL4O94818 638 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 SERPING1P05155 500 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 CHN1P15882 459 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 IFNAR2P48551 515 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 UHMK1Q8TAS1 419 aaKnown RBP15.28■□□□□ 0.04
VPS52-212ENST00000445902 AGAP11Q8TF27 550 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 LMBR1Q8WVP7 490 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 ELAC2Q9BQ52 826 aaKnown RBP15.28■□□□□ 0.04
VPS52-212ENST00000445902 TRIM51Q9BSJ1 452 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 TMEM59LQ9UK28 342 aa15.28■□□□□ 0.04
VPS52-212ENST00000445902 NOC2LQ9Y3T9 749 aaKnown RBP15.28■□□□□ 0.04
VPS52-212ENST00000445902 MYMKA6NI61 221 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 ENO4A6NNW6 628 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 SHBGP04278 402 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 MMEP08473 750 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 KLHL30Q0D2K2 578 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 AGBL2Q5U5Z8 902 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 ADAT2Q7Z6V5 191 aaKnown RBP15.27■□□□□ 0.04
VPS52-212ENST00000445902 ANKS1AQ92625 1134 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 IQCDQ96DY2 449 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 TSPY2A6NKD2 308 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 HGSO14964 777 aaPredicted RBP15.27■□□□□ 0.04
VPS52-212ENST00000445902 UPP2O95045 317 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 KIF4AO95239 1232 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 GYG1P46976 350 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 KCNJ2P63252 427 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 SLC18A3Q16572 532 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 BZW1Q7L1Q6 419 aaKnown RBP15.27■□□□□ 0.04
VPS52-212ENST00000445902 LRRC34Q8IZ02 419 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms