RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 KRT5P13647 590 aa11.63□□□□□ -0.55
TOP3B-210ENST00000444502 CCNE1P24864 410 aa11.63□□□□□ -0.55
TOP3B-210ENST00000444502 CKAP4Q07065 602 aaKnown RBP11.63□□□□□ -0.55
TOP3B-210ENST00000444502 AK8Q96MA6 479 aa11.63□□□□□ -0.55
TOP3B-210ENST00000444502 FAM107BQ9H098 131 aa11.63□□□□□ -0.55
TOP3B-210ENST00000444502 SH3GLB2Q9NR46 395 aa11.63□□□□□ -0.55
TOP3B-210ENST00000444502 CPSF2Q9P2I0 782 aaKnown RBP11.63□□□□□ -0.55
TOP3B-210ENST00000444502 LRRC37A3O60309 1634 aa11.63□□□□□ -0.55
TOP3B-210ENST00000444502 NDUFB10O96000 172 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 PPARDQ03181 441 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 DPYDQ12882 1025 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 TTC19Q6DKK2 380 aaPredicted RBP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 WDR24Q96S15 920 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 RMDN3Q96TC7 470 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 GPR75-ASB3A0A0A6YYF3 556 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 DKC1O60832 514 aaKnown RBP eCLIP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 CTNNA2P26232 953 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 MARK3P27448 753 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 ODR4Q5SWX8 454 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 RNF207Q6ZRF8 634 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 SEPT9Q9UHD8 586 aaPredicted RBP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 RABGAP1Q9Y3P9 1069 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 KRT19P08727 400 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 GBP2P32456 591 aaPredicted RBP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 CLNS1AP54105 237 aaKnown RBP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 CCNA1P78396 465 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 RCSD1Q6JBY9 416 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 FOXR1Q6PIV2 292 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 DEPTORQ8TB45 409 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 IFIH1Q9BYX4 1025 aaKnown RBP11.62□□□□□ -0.55
TOP3B-210ENST00000444502 FAM205AQ6ZU69 1335 aa11.62□□□□□ -0.55
TOP3B-210ENST00000444502 EFCAB8A8MWE9 144 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 K7ENM7 598 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 DDNO94850 711 aaPredicted RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 CETN2P41208 172 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 HHIPL2Q6UWX4 724 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 FAM160B2Q86V87 743 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 APOBEC3FQ8IUX4 373 aaKnown RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 DHTKD1Q96HY7 919 aaPredicted RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 RNF146Q9NTX7 359 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 DONSONQ9NYP3 566 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 HERC5Q9UII4 1024 aaKnown RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 SUGT1Q9Y2Z0 365 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 A0A087X0B3 334 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 ATP2C2O75185 946 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 OSBPP22059 807 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 CTTNQ14247 550 aaKnown RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 SLC51AQ86UW1 340 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 PIGOQ8TEQ8 1089 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 SH2D3AQ9BRG2 576 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 IL17RBQ9NRM6 502 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 LARSQ9P2J5 1176 aaKnown RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 SFI1A8K8P3 1242 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 SCP2P22307 547 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 EEF1GP26641 437 aaKnown RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 POLGP54098 1239 aaPredicted RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 TC2NQ8N9U0 490 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 LSM14BQ9BX40 385 aaKnown RBP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 FBXO28Q9NVF7 368 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.61□□□□□ -0.55
TOP3B-210ENST00000444502 KDM3AQ9Y4C1 1321 aa11.61□□□□□ -0.55
TOP3B-210ENST00000444502 BUB1O43683 1085 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 TNNI1P19237 187 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 INPP5BP32019 993 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 FXR1P51114 621 aaKnown RBP eCLIP11.6□□□□□ -0.55
TOP3B-210ENST00000444502 ARHGAP44Q17R89 818 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 C9orf131Q5VYM1 1079 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 OTUD6AQ7L8S5 288 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 N4BP2L2Q92802 583 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-210ENST00000444502 ZKSCAN4Q969J2 545 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-210ENST00000444502 MAD2L2Q9UI95 211 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 MYO6Q9UM54 1294 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 PHLPP2Q6ZVD8 1323 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 STXBP3O00186 592 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 WNT7AO00755 349 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 POLR2FP61218 127 aaKnown RBP11.6□□□□□ -0.55
TOP3B-210ENST00000444502 FBXW10Q5XX13 1052 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 MB21D1Q8N884 522 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 PANX2Q96RD6 677 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 RPAP3Q9H6T3 665 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-210ENST00000444502 SLC5A4Q9NY91 659 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 CDC23Q9UJX2 597 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 SAR1BQ9Y6B6 198 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 CAPN7Q9Y6W3 813 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 TTC26A0AVF1 554 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 GCKP35557 465 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 ADAM9Q13443 819 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 SLC9C1Q4G0N8 1177 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 TADA2BQ86TJ2 420 aa11.6□□□□□ -0.55
TOP3B-210ENST00000444502 GPR161Q8N6U8 529 aaKnown RBP11.6□□□□□ -0.55
TOP3B-210ENST00000444502 IFT81Q8WYA0 676 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms