RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 TXNRD3Q86VQ6 643 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 IKZF4Q9H2S9 585 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 GREB1LQ9C091 1923 aaPredicted RBP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 GOLGA6L10A0A0M3HER8 536 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 DAPK3O43293 454 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 NR2E1Q9Y466 385 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 TAF1P21675 1872 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 CTNNA1P35221 906 aaKnown RBP11.5□□□□□ -0.57
SCAF4-203ENST00000434667 NAPAP54920 295 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 DIXDC1Q155Q3 683 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 ECM1Q16610 540 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 ALS2CLQ60I27 953 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 BRINP3Q76B58 766 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 B4GALNT4Q76KP1 1039 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 CDK5RAP3Q96JB5 506 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 TCP11L1Q9NUJ3 509 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 TRAF5O00463 557 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 TDP2O95551 362 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 SLURP2P0DP57 97 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 MAGOHP61326 146 aaKnown RBP11.5□□□□□ -0.57
SCAF4-203ENST00000434667 GRIK5Q16478 980 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 KDM7AQ6ZMT4 941 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 CPLX4Q7Z7G2 160 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 MAGOHBQ96A72 148 aaKnown RBP11.5□□□□□ -0.57
SCAF4-203ENST00000434667 DHTKD1Q96HY7 919 aaPredicted RBP11.5□□□□□ -0.57
SCAF4-203ENST00000434667 NUP58Q9BVL2 599 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 CHORDC1Q9UHD1 332 aaPredicted RBP11.5□□□□□ -0.57
SCAF4-203ENST00000434667 LEMD3Q9Y2U8 911 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 CCDC172P0C7W6 258 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 CLNS1AP54105 237 aaKnown RBP11.5□□□□□ -0.57
SCAF4-203ENST00000434667 GJB7Q6PEY0 223 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 TRIM51Q9BSJ1 452 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 GDF3Q9NR23 364 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 MYH1P12882 1939 aa11.5□□□□□ -0.57
SCAF4-203ENST00000434667 SLC37A4O43826 429 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 CCDC121Q6ZUS5 278 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 TBCKQ8TEA7 893 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 CAVIN3Q969G5 261 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 COA7Q96BR5 231 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 TSGA10Q9BZW7 698 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 TPX2Q9ULW0 747 aaKnown RBP11.49□□□□□ -0.57
SCAF4-203ENST00000434667 FRMPD2Q68DX3 1309 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-203ENST00000434667 GRID2IPA4D2P6 1211 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 NOL4O94818 638 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 PAK2Q13177 524 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 KCNB1Q14721 858 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 FAM83BQ5T0W9 1011 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
SCAF4-203ENST00000434667 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.49□□□□□ -0.578e-7■■■■■ 56.9
SCAF4-203ENST00000434667 ODF2LQ9ULJ1 636 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 L3MBTL1Q9Y468 752 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 FSBPO95073 299 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 KRT18P05783 430 aaKnown RBP11.49□□□□□ -0.57
SCAF4-203ENST00000434667 MYBL1P10243 752 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 IFNAR2P48551 515 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 ZNF844Q08AG5 666 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-203ENST00000434667 RAPGEF5Q92565 580 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 TAF4BQ92750 862 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 SELENOSQ9BQE4 189 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 LBHD1Q9BQE6 289 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-203ENST00000434667 MLXIPLQ9NP71 852 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 BLOC1S4Q9NUP1 217 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
SCAF4-203ENST00000434667 SMCO2A6NFE2 343 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 OR52Z1P0C646 297 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 ECHS1P30084 290 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 SLCO1A2P46721 670 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 BYSLQ13895 437 aaKnown RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 TCERG1LQ5VWI1 586 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 ARL6IP4Q66PJ3 421 aaKnown RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 AADACL2Q6P093 401 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 FAM84BQ96KN1 310 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 MKNK2Q9HBH9 465 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 NRXN2Q9P2S2 1712 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 TTI1O43156 1089 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 DDAH1O94760 285 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 SHBGP04278 402 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 EPB41P11171 864 aaKnown RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 GRB10Q13322 594 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 CCDC38Q502W7 563 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 FAM133BQ5BKY9 247 aaKnown RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 CYB5D1Q6P9G0 228 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 ZSCAN29Q8IWY8 852 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 TCP11Q8WWU5 503 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 ATP8A1Q9Y2Q0 1164 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 BICDL2A1A5D9 508 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 STXBP3O00186 592 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 ASTE1Q2TB18 679 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 TEX2Q8IWB9 1127 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 DDX12PQ92771 950 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 THOC1Q96FV9 657 aaKnown RBP11.48□□□□□ -0.57
SCAF4-203ENST00000434667 PNMA2Q9UL42 364 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 PCNTO95613 3336 aa11.48□□□□□ -0.57
SCAF4-203ENST00000434667 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 440.8 ms