RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SSX2IPQ9Y2D8 614 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 SALL3Q9BXA9 1300 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 HNRNPDLO14979 420 aaKnown RBP12.6□□□□□ -0.39
PTCH1-208ENST00000430669 ANKRD36BP1Q96IX9 119 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PCDHA6Q9UN73 950 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PCDHA8Q9Y5H6 950 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 NAALADL2Q58DX5 795 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-208ENST00000430669 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 C21orf2O43822 256 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
PTCH1-208ENST00000430669 UBE2Q2Q8WVN8 375 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 AIFM3Q96NN9 605 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 JRKLQ9Y4A0 524 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 ATP8B1O43520 1251 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PRELPP51888 382 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PPP4CP60510 307 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PTK2Q05397 1052 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 RNF207Q6ZRF8 634 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 KIAA1586Q9HCI6 787 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
PTCH1-208ENST00000430669 CCDC89Q8N998 374 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 PHF20Q9BVI0 1012 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 KCND2Q9NZV8 630 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 E7EVH7 732 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 CYP2D6P10635 497 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 CYP4A11Q02928 519 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 RAD54LQ92698 747 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 FNBP4Q8N3X1 1017 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-208ENST00000430669 FAM167AQ96KS9 214 aa12.6□□□□□ -0.39
PTCH1-208ENST00000430669 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-208ENST00000430669 LRRIQ4A6NIV6 560 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 KIF11P52732 1056 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 CCDC25Q86WR0 208 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 MCPH1Q8NEM0 835 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 CEP104O60308 925 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 STAM2O75886 525 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 PBKQ96KB5 322 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 MTMR1Q13613 665 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 KIF22Q14807 665 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 ARHGAP44Q17R89 818 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 U2AF1L4Q8WU68 220 aaKnown RBP12.59□□□□□ -0.39
PTCH1-208ENST00000430669 TCP11Q8WWU5 503 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 GOLPH3LQ9H4A5 285 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 ZNF408Q9H9D4 720 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 APBA1Q02410 837 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 CCSER1Q9C0I3 900 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 HOMER3Q9NSC5 361 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 UBE4BO95155 1302 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 SALL1Q9NSC2 1324 aa12.59□□□□□ -0.39
PTCH1-208ENST00000430669 HADHQ16836 314 aaKnown RBP12.59□□□□□ -0.39
PTCH1-208ENST00000430669 LRMPQ12912 555 aa12.58□□□□□ -0.39
PTCH1-208ENST00000430669 ARHGEF6Q15052 776 aa12.58□□□□□ -0.39
PTCH1-208ENST00000430669 MTMR4Q9NYA4 1195 aa12.58□□□□□ -0.39
PTCH1-208ENST00000430669 CD2APQ9Y5K6 639 aa12.58□□□□□ -0.39
PTCH1-208ENST00000430669 MED7O43513 233 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 ENTPD3O75355 529 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 GPR162Q16538 588 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 CDC23Q9UJX2 597 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 LOXHD1Q8IVV2 1947 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 ZEB2O60315 1214 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 LDHAP00338 332 aaKnown RBP12.58□□□□□ -0.4
PTCH1-208ENST00000430669 KRT76Q01546 638 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 KRT31Q15323 416 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 DHX40Q8IX18 779 aaKnown RBP12.58□□□□□ -0.4
PTCH1-208ENST00000430669 TSC1Q92574 1164 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 IFT122Q9HBG6 1241 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 DTNBO60941 627 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 KRT19P08727 400 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 TMEM191BP0C7N4 346 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 LGALS16A8MUM7 142 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 WDR64B1ANS9 1081 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 KRIT1O00522 736 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 HSPA6P17066 643 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 UBE2SQ16763 222 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 KCNV1Q6PIU1 500 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 PALM3A6NDB9 673 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-208ENST00000430669 H2AFZP0C0S5 128 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 SCP2P22307 547 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 KCNJ6P48051 423 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 H2AFVQ71UI9 128 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 CCDC105Q8IYK2 499 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 SMYD4Q8IYR2 804 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-208ENST00000430669 CCHCR1Q8TD31 782 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 P3H4Q92791 437 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 NDST4Q9H3R1 872 aa12.58□□□□□ -0.4
PTCH1-208ENST00000430669 DIS3Q9Y2L1 958 aaKnown RBP12.58□□□□□ -0.4
PTCH1-208ENST00000430669 PHBP35232 272 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 SLFNL1Q499Z3 407 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms