RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 FIBPO43427 364 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 GTPBP6O43824 516 aaPredicted RBP13.83□□□□□ -0.2
TTC3-208ENST00000428693 NBNO60934 754 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 STAM2O75886 525 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 BAIAP3O94812 1187 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 SMIM10L2AP0DMW4 78 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 SMIM10L2BP0DMW5 78 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 WDR5P61964 334 aaKnown RBP13.83□□□□□ -0.2
TTC3-208ENST00000428693 FGD1P98174 961 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 COL9A3Q14050 684 aaPredicted RBP13.83□□□□□ -0.2
TTC3-208ENST00000428693 UBE2SQ16763 222 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 CENPQQ7L2Z9 268 aaPredicted RBP13.83□□□□□ -0.2
TTC3-208ENST00000428693 SYMPKQ92797 1274 aaKnown RBP13.83□□□□□ -0.2
TTC3-208ENST00000428693 WNT8BQ93098 351 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 TCEANC2Q96MN5 208 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 C16orf70Q9BSU1 422 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 MTA3Q9BTC8 594 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
TTC3-208ENST00000428693 THEGQ9P2T0 379 aa13.83□□□□□ -0.2
TTC3-208ENST00000428693 SPDYE3A6NKU9 549 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 SPATA31C2B4DYI2 1134 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 PARNO95453 639 aaKnown RBP13.82□□□□□ -0.2
TTC3-208ENST00000428693 CTSHP09668 335 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 LIFRP42702 1097 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 DEFB103AP81534 67 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 IKBKEQ14164 716 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 TJAP1Q5JTD0 557 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 METTL7BQ6UX53 244 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 TRIM50Q86XT4 487 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 FANCBQ8NB91 859 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 INPP4AQ96PE3 977 aaPredicted RBP13.82□□□□□ -0.2
TTC3-208ENST00000428693 NEK1Q96PY6 1258 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
TTC3-208ENST00000428693 MTUS1Q9ULD2 1270 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 DOCK5Q9H7D0 1870 aa13.82□□□□□ -0.2
TTC3-208ENST00000428693 CHD7Q9P2D1 2997 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 RSPH10B2B2RC85 870 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 MEIS2O14770 477 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 TREHO43280 583 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 RSPH10BP0C881 870 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 SMARCA1P28370 1054 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 ARHGAP4P98171 946 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
TTC3-208ENST00000428693 SEMA3FQ13275 785 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 HIC1Q14526 733 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 NECTIN1Q15223 517 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 BMP2KLQ5H9B9 411 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 TMTC3Q6ZXV5 915 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 GPR20Q99678 358 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 RNPEPQ9H4A4 650 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 SETD4Q9NVD3 440 aa13.81□□□□□ -0.2
TTC3-208ENST00000428693 ABHD14A-ACY1A0A1B0GW23 586 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 LGR5O75473 907 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 ARHGEF15O94989 841 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 GNAT1P11488 350 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 HOXD8P13378 290 aaPredicted RBP13.8□□□□□ -0.2
TTC3-208ENST00000428693 ICAM3P32942 547 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 NAPAP54920 295 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 TAP1Q03518 808 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 GPNMBQ14956 572 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 XRRA1Q6P2D8 792 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 EHMT1Q9H9B1 1298 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 TELO2Q9Y4R8 837 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 FRMPD4Q14CM0 1322 aa13.8□□□□□ -0.2
TTC3-208ENST00000428693 TTC28Q96AY4 2481 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 LCHNA4D1U4 455 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 EPOPA6NHQ4 379 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 ZBTB43O43298 467 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 CDC45O75419 566 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 CXCL10P02778 98 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 MARK3P27448 753 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 TCF7P36402 384 aaPredicted RBP13.79□□□□□ -0.2
TTC3-208ENST00000428693 MRPS5P82675 430 aaKnown RBP13.79□□□□□ -0.2
TTC3-208ENST00000428693 RBL2Q08999 1139 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 RTN1Q16799 776 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 TRIM71Q2Q1W2 868 aaKnown RBP13.79□□□□□ -0.2
TTC3-208ENST00000428693 KRT40Q6A162 431 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 SPRED2Q7Z698 418 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 SERINC5Q86VE9 423 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 GIMAP8Q8ND71 665 aaPredicted RBP13.79□□□□□ -0.2
TTC3-208ENST00000428693 DBF4BQ8NFT6 615 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 ATXN2LQ8WWM7 1075 aaKnown RBP13.79□□□□□ -0.2
TTC3-208ENST00000428693 GLG1Q92896 1179 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 CDHR1Q96JP9 859 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 PCDHA6Q9UN73 950 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 PCDHA8Q9Y5H6 950 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 EMSYQ7Z589 1322 aa13.79□□□□□ -0.2
TTC3-208ENST00000428693 PRRC2BQ5JSZ5 2229 aaKnown RBP13.79□□□□□ -0.2
TTC3-208ENST00000428693 KAT6AQ92794 2004 aa13.78□□□□□ -0.2
TTC3-208ENST00000428693 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
TTC3-208ENST00000428693 GOLGA8AA7E2F4 631 aa13.78□□□□□ -0.2
TTC3-208ENST00000428693 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
TTC3-208ENST00000428693 EFCAB14O75071 495 aa13.78□□□□□ -0.2
TTC3-208ENST00000428693 ATP9AO75110 1047 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms