RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ADAMTS1Q9UHI8 967 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 ZMYND8Q9ULU4 1186 aaPredicted RBP12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 SPDYE5A6NIY4 337 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 MMEP08473 750 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 EVA1CP58658 441 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 FAM47EQ6ZV65 393 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 FERMT2Q96AC1 680 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 CHMP6Q96FZ7 201 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 UIMC1Q96RL1 719 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 PLAGL2Q9UPG8 496 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
SEC61A1-202ENST00000424880 IGF2BP3O00425 579 aaKnown RBP eCLIP12.37□□□□□ -0.438e-7■■□□□ 14.3
SEC61A1-202ENST00000424880 CLSTN1O94985 981 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 KRT16P08779 473 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 NLRP5P59047 1200 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 ZNF662Q6ZS27 426 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 SPIRE2Q8WWL2 714 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.432e-6■■■□□ 15
SEC61A1-202ENST00000424880 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 LRP6O75581 1613 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 GLI3P10071 1580 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 TNKSO95271 1327 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 SMIM24O75264 130 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 PDCD2Q16342 344 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 LCORLQ8N3X6 602 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 DPPA5A6NC42 116 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 TTI1O43156 1089 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 GNAT1P11488 350 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 ITIH3Q06033 890 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 LRRC41Q15345 812 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 KIAA0753Q2KHM9 967 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 ZNF572Q7Z3I7 529 aaPredicted RBP12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 GLIS3Q8NEA6 775 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 TBC1D5Q92609 795 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 PHF20Q9BVI0 1012 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 OSBPL1AQ9BXW6 950 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 PICK1Q9NRD5 415 aa12.37□□□□□ -0.43
SEC61A1-202ENST00000424880 H0Y3Z8 333 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 SART1O43290 800 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 HSPA9P38646 679 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 CTCFP49711 727 aaPredicted RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 RAB27AP51159 221 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 LACTB2Q53H82 288 aaPredicted RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 ANKRD20A2Q5SQ80 823 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 ANKRD20A1Q5TYW2 823 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 ANKRD20A3Q5VUR7 823 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 OTUD6AQ7L8S5 288 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 RETREG2Q8NC44 543 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 XPO6Q96QU8 1125 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 ORC4O43929 436 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 DNAJC8O75937 253 aaPredicted RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 PCCAP05165 728 aaPredicted RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 ASIC1P78348 528 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 SLMAPQ14BN4 828 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 NPY5RQ15761 445 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 DYMQ7RTS9 669 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 WHAMMQ8TF30 809 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 CCDC47Q96A33 483 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 CNNM1Q9NRU3 951 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 RMND1Q9NWS8 449 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 NOP53Q9NZM5 478 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 ECM29Q5VYK3 1845 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 WDR19Q8NEZ3 1342 aa12.36□□□□□ -0.43
SEC61A1-202ENST00000424880 GSG1L2A8MUP6 293 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 KLRC4O43908 158 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 XBP1P17861 261 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 TNFRSF8P28908 595 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 CRELD2Q6UXH1 353 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 CD302Q8IX05 232 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 PSMD1Q99460 953 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 PLCB1Q9NQ66 1216 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 SLC5A4Q9NY91 659 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 LIN7AO14910 233 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 TAF11Q15544 211 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 LONP2Q86WA8 852 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 DRAXINQ8NBI3 349 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 KDM4CQ9H3R0 1056 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 ECT2Q9H8V3 914 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 GPR108Q9NPR9 543 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 PRLRP16471 622 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 UBA7P41226 1012 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 TRPM8Q7Z2W7 1104 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms