RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MB21D2Q8IYB1 491 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-205ENST00000423214 ZNF654Q8IZM8 581 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 GDPD5Q8WTR4 605 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 ATP6V0A1Q93050 837 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 C16orf70Q9BSU1 422 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 SPZ1Q9BXG8 430 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 TUT1Q9H6E5 874 aaKnown RBP18.64■□□□□ 0.57
COL18A1-205ENST00000423214 FIBPO43427 364 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 NEDD9Q14511 834 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 TCTN1Q2MV58 587 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 NFXL1Q6ZNB6 911 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 INPP4AQ96PE3 977 aaPredicted RBP18.63■□□□□ 0.57
COL18A1-205ENST00000423214 MAP3K14Q99558 947 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 RAD9AQ99638 391 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 MYL10Q9BUA6 226 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 LY9Q9HBG7 655 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 ZNF215Q9UL58 517 aaPredicted RBP18.63■□□□□ 0.57
COL18A1-205ENST00000423214 COG5Q9UP83 839 aa18.63■□□□□ 0.57
COL18A1-205ENST00000423214 RSPH10B2B2RC85 870 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 AMHP03971 560 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 RSPH10BP0C881 870 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 SMIM10L2AP0DMW4 78 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 SMIM10L2BP0DMW5 78 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 ICAM3P32942 547 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 MRPS9P82933 396 aaKnown RBP18.62■□□□□ 0.57
COL18A1-205ENST00000423214 HIC1Q14526 733 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 MBTPS1Q14703 1052 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 TRAF7Q6Q0C0 670 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 METTL7BQ6UX53 244 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 CYFIP1Q7L576 1253 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 IGDCC4Q8TDY8 1250 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 TGS1Q96RS0 853 aaKnown RBP18.62■□□□□ 0.57
COL18A1-205ENST00000423214 USP26Q9BXU7 913 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 MTUS1Q9ULD2 1270 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 ATG2AQ2TAZ0 1938 aa18.62■□□□□ 0.57
COL18A1-205ENST00000423214 CCDC69A6NI79 296 aa18.61■□□□□ 0.57
COL18A1-205ENST00000423214 PRC1O43663 620 aa18.61■□□□□ 0.57
COL18A1-205ENST00000423214 GNAT1P11488 350 aa18.61■□□□□ 0.57
COL18A1-205ENST00000423214 KCNQ1P51787 676 aa18.61■□□□□ 0.57
COL18A1-205ENST00000423214 SP4Q02446 784 aa18.61■□□□□ 0.57
COL18A1-205ENST00000423214 MYOCDQ8IZQ8 938 aa18.61■□□□□ 0.57
COL18A1-205ENST00000423214 RTEL1Q9NZ71 1219 aa18.61■□□□□ 0.57
COL18A1-205ENST00000423214 LINC01553A4QN01 128 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 TREHO43280 583 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 CAND2O75155 1236 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 CTSHP09668 335 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 MCM5P33992 734 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 GNAQP50148 359 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 PCNX4Q63HM2 1172 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 NLRX1Q86UT6 975 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 TRIM50Q86XT4 487 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 HLA-CQ95604 372 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 LZTS2Q9BRK4 669 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 MTA3Q9BTC8 594 aa18.6■□□□□ 0.57
COL18A1-205ENST00000423214 SPATA31C2B4DYI2 1134 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 HOXC8P31273 242 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 SEMA3FQ13275 785 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 UTP14CQ5TAP6 766 aaKnown RBP18.59■□□□□ 0.57
COL18A1-205ENST00000423214 XRRA1Q6P2D8 792 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 DBF4BQ8NFT6 615 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 SEPT8Q92599 483 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 TMEM87BQ96K49 555 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 NECAB3Q96P71 396 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-205ENST00000423214 GPR20Q99678 358 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 RNPEPQ9H4A4 650 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 BCAS3Q9H6U6 928 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 INSL6Q9Y581 213 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 COL4A6Q14031 1691 aa18.59■□□□□ 0.57
COL18A1-205ENST00000423214 PIK3CDO00329 1044 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 LPXNO60711 386 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 PLEKHA8P1O95397 391 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 CALM1P0DP23 149 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 CALM2P0DP24 149 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 CALM3P0DP25 149 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 BMP1P13497 986 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 SMARCA1P28370 1054 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 ERVK-21P61565 698 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 PLEKHG4Q58EX7 1191 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.58■□□□□ 0.562e-22■■■□□ 16.8
COL18A1-205ENST00000423214 TMTC2Q8N394 836 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 GIMAP8Q8ND71 665 aaPredicted RBP18.58■□□□□ 0.56
COL18A1-205ENST00000423214 LMCD1Q9NZU5 365 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 KIAA1671Q9BY89 1806 aa18.58■□□□□ 0.56
COL18A1-205ENST00000423214 SH2B2O14492 632 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-205ENST00000423214 RXRAP19793 462 aa18.57■□□□□ 0.56
COL18A1-205ENST00000423214 ARHGAP4P98171 946 aa18.57■□□□□ 0.56
COL18A1-205ENST00000423214 FBXO22Q8NEZ5 403 aa18.57■□□□□ 0.56
COL18A1-205ENST00000423214 CDHR1Q96JP9 859 aa18.57■□□□□ 0.56
COL18A1-205ENST00000423214 SENP7Q9BQF6 1050 aa18.57■□□□□ 0.56
COL18A1-205ENST00000423214 SETD4Q9NVD3 440 aa18.57■□□□□ 0.56
COL18A1-205ENST00000423214 MYH9P35579 1960 aaKnown RBP18.56■□□□□ 0.56
COL18A1-205ENST00000423214 MEIS2O14770 477 aa18.56■□□□□ 0.56
COL18A1-205ENST00000423214 COL9A1P20849 921 aa18.56■□□□□ 0.56
COL18A1-205ENST00000423214 LMBR1Q8WVP7 490 aa18.56■□□□□ 0.56
COL18A1-205ENST00000423214 GPRASP2Q96D09 838 aa18.56■□□□□ 0.56
COL18A1-205ENST00000423214 YME1L1Q96TA2 773 aa18.56■□□□□ 0.56
COL18A1-205ENST00000423214 PSTPIP2Q9H939 334 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms