RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 UBA1P22314 1058 aaKnown RBP19.44■□□□□ 0.7
CHMP3-203ENST00000409225 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
CHMP3-203ENST00000409225 DGKHQ86XP1 1220 aa19.44■□□□□ 0.7
CHMP3-203ENST00000409225 ESR2Q92731 530 aa19.44■□□□□ 0.7
CHMP3-203ENST00000409225 PDCD2LQ9BRP1 358 aa19.44■□□□□ 0.7
CHMP3-203ENST00000409225 ATG2AQ2TAZ0 1938 aa19.44■□□□□ 0.7
CHMP3-203ENST00000409225 H3BRB1 525 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 STXBP3O00186 592 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 GTF2F1P35269 517 aaKnown RBP eCLIP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 SP2Q02086 613 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 SMAD4Q13485 552 aaKnown RBP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 KCNV1Q6PIU1 500 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 GPKOWQ92917 476 aaPredicted RBP eCLIP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 ZFP91Q96JP5 570 aaPredicted RBP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 C11orf84Q9BUA3 381 aaPredicted RBP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 RNPEPQ9H4A4 650 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 RNF41Q9H4P4 317 aaPredicted RBP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 TUT1Q9H6E5 874 aaKnown RBP19.43■□□□□ 0.7
CHMP3-203ENST00000409225 KAT14Q9H8E8 782 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 JMJD4Q9H9V9 463 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 MLXIPQ9HAP2 919 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 SALL3Q9BXA9 1300 aa19.43■□□□□ 0.7
CHMP3-203ENST00000409225 C5orf42Q9H799 3197 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 TECTAO75443 2155 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 C5orf67F2Z3F1 127 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 OPLAHO14841 1288 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 LINC01565O15544 149 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 CAND2O75155 1236 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 TBX10O75333 385 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 LGALS2P05162 132 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 RB1P06400 928 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 HOXC8P31273 242 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 BMPR1AP36894 532 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 HSD17B4P51659 736 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 ASPRV1Q53RT3 343 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 IER5LQ5T953 404 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 IL31RAQ8NI17 732 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 EDAQ92838 391 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 APBB2Q92870 758 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 LMAN2LQ9H0V9 348 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 CD207Q9UJ71 328 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 MYH6P13533 1939 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 CCDC171Q6TFL3 1326 aa19.42■□□□□ 0.7
CHMP3-203ENST00000409225 HOXA13P31271 388 aaPredicted RBP19.41■□□□□ 0.7
CHMP3-203ENST00000409225 PTPN5P54829 565 aa19.41■□□□□ 0.7
CHMP3-203ENST00000409225 NMIQ13287 307 aaPredicted RBP19.41■□□□□ 0.7
CHMP3-203ENST00000409225 PGM5Q15124 567 aa19.41■□□□□ 0.7
CHMP3-203ENST00000409225 SETD4Q9NVD3 440 aa19.41■□□□□ 0.7
CHMP3-203ENST00000409225 RWDD3Q9Y3V2 267 aa19.41■□□□□ 0.7
CHMP3-203ENST00000409225 TRIOO75962 3097 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 TMEM221A6NGB7 291 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 M0R296 226 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 KDM4AO75164 1064 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 PARP1P09874 1014 aaKnown RBP19.4■□□□□ 0.7
CHMP3-203ENST00000409225 LINC00271P0C7V0 271 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 VSIG10LQ86VR7 867 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 IQCA1Q86XH1 822 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 PBXIP1Q96AQ6 731 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 AMNQ9BXJ7 453 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 BCAS3Q9H6U6 928 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 PCDHB15Q9Y5E8 787 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 ADGRA3Q8IWK6 1321 aa19.4■□□□□ 0.7
CHMP3-203ENST00000409225 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.69
CHMP3-203ENST00000409225 TGFB3P10600 412 aa19.39■□□□□ 0.69
CHMP3-203ENST00000409225 CCND2P30279 289 aa19.39■□□□□ 0.69
CHMP3-203ENST00000409225 NDUFV1P49821 464 aa19.39■□□□□ 0.69
CHMP3-203ENST00000409225 CCDC178Q5BJE1 867 aa19.39■□□□□ 0.69
CHMP3-203ENST00000409225 TRIM67Q6ZTA4 783 aa19.39■□□□□ 0.69
CHMP3-203ENST00000409225 STOX1Q6ZVD7 989 aa19.39■□□□□ 0.69
CHMP3-203ENST00000409225 ZBTB47Q9UFB7 747 aaPredicted RBP19.39■□□□□ 0.69
CHMP3-203ENST00000409225 NOP56O00567 594 aaKnown RBP19.38■□□□□ 0.69
CHMP3-203ENST00000409225 ST18O60284 1047 aa19.38■□□□□ 0.69
CHMP3-203ENST00000409225 GNAT1P11488 350 aa19.38■□□□□ 0.69
CHMP3-203ENST00000409225 GHRHRQ02643 423 aa19.38■□□□□ 0.69
CHMP3-203ENST00000409225 ADAM15Q13444 863 aa19.38■□□□□ 0.69
CHMP3-203ENST00000409225 BMP8AQ7Z5Y6 402 aa19.38■□□□□ 0.69
CHMP3-203ENST00000409225 SUGP1Q8IWZ8 645 aaKnown RBP19.38■□□□□ 0.69
CHMP3-203ENST00000409225 ZSCAN10Q96SZ4 725 aaPredicted RBP19.38■□□□□ 0.69
CHMP3-203ENST00000409225 ALG13Q9NP73 1137 aaKnown RBP19.38■□□□□ 0.69
CHMP3-203ENST00000409225 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
CHMP3-203ENST00000409225 ZNF213O14771 459 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 PPP1R11O60927 126 aaPredicted RBP19.37■□□□□ 0.69
CHMP3-203ENST00000409225 MMP1P03956 469 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 GHRP10912 638 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 ARHGAP4P98171 946 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 BTG3Q14201 252 aaPredicted RBP19.37■□□□□ 0.69
CHMP3-203ENST00000409225 FAM26DQ5JW98 314 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 TRIM50Q86XT4 487 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 STAG2Q8N3U4 1231 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
CHMP3-203ENST00000409225 CLP1Q92989 425 aaKnown RBP19.37■□□□□ 0.69
CHMP3-203ENST00000409225 USP26Q9BXU7 913 aa19.37■□□□□ 0.69
CHMP3-203ENST00000409225 RC3H2Q9HBD1 1191 aaKnown RBP19.37■□□□□ 0.69
CHMP3-203ENST00000409225 TCF15Q12870 199 aa19.36■□□□□ 0.69
CHMP3-203ENST00000409225 UTP14CQ5TAP6 766 aaKnown RBP19.36■□□□□ 0.69
CHMP3-203ENST00000409225 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
CHMP3-203ENST00000409225 FCHSD1Q86WN1 690 aa19.36■□□□□ 0.69
CHMP3-203ENST00000409225 MSLNLQ96KJ4 702 aa19.36■□□□□ 0.69
CHMP3-203ENST00000409225 MAP3K20Q9NYL2 800 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms