RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 RSPH10BP0C881 870 aa22.42■■□□□ 1.18
HDAC11-205ENST00000404548 MRPS9P82933 396 aaKnown RBP22.42■■□□□ 1.18
HDAC11-205ENST00000404548 PLEKHG4Q58EX7 1191 aa22.42■■□□□ 1.18
HDAC11-205ENST00000404548 SPRED2Q7Z698 418 aa22.42■■□□□ 1.18
HDAC11-205ENST00000404548 TMCO2Q7Z6W1 182 aaPredicted RBP22.42■■□□□ 1.18
HDAC11-205ENST00000404548 IGDCC4Q8TDY8 1250 aa22.42■■□□□ 1.18
HDAC11-205ENST00000404548 GPKOWQ92917 476 aaPredicted RBP eCLIP22.42■■□□□ 1.18
HDAC11-205ENST00000404548 ATP6V0A1Q93050 837 aa22.42■■□□□ 1.18
HDAC11-205ENST00000404548 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
HDAC11-205ENST00000404548 INSL6Q9Y581 213 aa22.42■■□□□ 1.18
HDAC11-205ENST00000404548 BRWD1Q9NSI6 2320 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 BAZ2BQ9UIF8 2168 aaKnown RBP22.41■■□□□ 1.18
HDAC11-205ENST00000404548 PIK3CDO00329 1044 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 NOP56O00567 594 aaKnown RBP22.41■■□□□ 1.18
HDAC11-205ENST00000404548 SMIM10L2AP0DMW4 78 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 SMIM10L2BP0DMW5 78 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 COL9A1P20849 921 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 THPOP40225 353 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 MB21D2Q8IYB1 491 aaPredicted RBP22.41■■□□□ 1.18
HDAC11-205ENST00000404548 MAP4K1Q92918 833 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 SENP7Q9BQF6 1050 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 TAF6LQ9Y6J9 622 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 COL4A6Q14031 1691 aa22.41■■□□□ 1.18
HDAC11-205ENST00000404548 DDAH1O94760 285 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 AMHP03971 560 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 GNAT1P11488 350 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 KIF5BP33176 963 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 ANTXR2P58335 489 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 HTRA4P83105 476 aaPredicted RBP22.4■■□□□ 1.18
HDAC11-205ENST00000404548 PCNX4Q63HM2 1172 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 DBF4BQ8NFT6 615 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 SP7Q8TDD2 431 aaPredicted RBP22.4■■□□□ 1.18
HDAC11-205ENST00000404548 GDPD5Q8WTR4 605 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 NECAB3Q96P71 396 aaPredicted RBP22.4■■□□□ 1.18
HDAC11-205ENST00000404548 LZTS2Q9BRK4 669 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 C1QTNF1Q9BXJ1 281 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 SUGCTQ9HAC7 445 aa22.4■■□□□ 1.18
HDAC11-205ENST00000404548 SORBS3O60504 671 aa22.39■■□□□ 1.17
HDAC11-205ENST00000404548 SEMA3FQ13275 785 aa22.39■■□□□ 1.17
HDAC11-205ENST00000404548 GPR20Q99678 358 aa22.39■■□□□ 1.17
HDAC11-205ENST00000404548 RNPEPQ9H4A4 650 aa22.39■■□□□ 1.17
HDAC11-205ENST00000404548 ZNF215Q9UL58 517 aaPredicted RBP22.39■■□□□ 1.17
HDAC11-205ENST00000404548 SIP14410 1827 aa22.38■■□□□ 1.17
HDAC11-205ENST00000404548 GIMAP8Q8ND71 665 aaPredicted RBP22.38■■□□□ 1.17
HDAC11-205ENST00000404548 CTCFLQ8NI51 663 aaPredicted RBP22.38■■□□□ 1.17
HDAC11-205ENST00000404548 RRP36Q96EU6 259 aaKnown RBP22.38■■□□□ 1.17
HDAC11-205ENST00000404548 SAMD11Q96NU1 681 aa22.38■■□□□ 1.17
HDAC11-205ENST00000404548 LY9Q9HBG7 655 aa22.38■■□□□ 1.17
HDAC11-205ENST00000404548 MICAL3Q7RTP6 2002 aa22.38■■□□□ 1.17
HDAC11-205ENST00000404548 TREHO43280 583 aa22.37■■□□□ 1.17
HDAC11-205ENST00000404548 ADAM17P78536 824 aa22.37■■□□□ 1.17
HDAC11-205ENST00000404548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.37■■□□□ 1.17
HDAC11-205ENST00000404548 CYFIP1Q7L576 1253 aa22.37■■□□□ 1.17
HDAC11-205ENST00000404548 ZNF654Q8IZM8 581 aa22.37■■□□□ 1.17
HDAC11-205ENST00000404548 SEPT8Q92599 483 aa22.37■■□□□ 1.17
HDAC11-205ENST00000404548 CUL5Q93034 780 aa22.37■■□□□ 1.17
HDAC11-205ENST00000404548 ZFP91Q96JP5 570 aaPredicted RBP22.37■■□□□ 1.17
HDAC11-205ENST00000404548 BCAS3Q9H6U6 928 aa22.37■■□□□ 1.17
HDAC11-205ENST00000404548 TCF20Q9UGU0 1960 aaKnown RBP22.37■■□□□ 1.17
HDAC11-205ENST00000404548 MEIS2O14770 477 aa22.36■■□□□ 1.17
HDAC11-205ENST00000404548 GNAQP50148 359 aa22.36■■□□□ 1.17
HDAC11-205ENST00000404548 TMTC2Q8N394 836 aa22.36■■□□□ 1.17
HDAC11-205ENST00000404548 SMARCC2Q8TAQ2 1214 aa22.36■■□□□ 1.17
HDAC11-205ENST00000404548 APBB2Q92870 758 aa22.36■■□□□ 1.17
HDAC11-205ENST00000404548 SEC63Q9UGP8 760 aaKnown RBP22.36■■□□□ 1.17
HDAC11-205ENST00000404548 FAM26DQ5JW98 314 aa22.35■■□□□ 1.17
HDAC11-205ENST00000404548 RPAINQ86UA6 219 aa22.35■■□□□ 1.17
HDAC11-205ENST00000404548 NLRX1Q86UT6 975 aa22.35■■□□□ 1.17
HDAC11-205ENST00000404548 MYOCDQ8IZQ8 938 aa22.35■■□□□ 1.17
HDAC11-205ENST00000404548 TOP1MTQ969P6 601 aa22.35■■□□□ 1.17
HDAC11-205ENST00000404548 CDHR1Q96JP9 859 aa22.35■■□□□ 1.17
HDAC11-205ENST00000404548 MTUS1Q9ULD2 1270 aa22.35■■□□□ 1.17
HDAC11-205ENST00000404548 RBM8AQ9Y5S9 174 aaKnown RBP22.35■■□□□ 1.17
HDAC11-205ENST00000404548 NRCAMQ92823 1304 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 FAM117BQ6P1L5 589 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 USP17L6PQ6QN14 398 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 CASC1Q6TDU7 716 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 FBXO22Q8NEZ5 403 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 GPRASP2Q96D09 838 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 TMEM87BQ96K49 555 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 SETD4Q9NVD3 440 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 RTEL1Q9NZ71 1219 aa22.34■■□□□ 1.17
HDAC11-205ENST00000404548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.33■■□□□ 1.17
HDAC11-205ENST00000404548 CALM1P0DP23 149 aa22.33■■□□□ 1.17
HDAC11-205ENST00000404548 CALM2P0DP24 149 aa22.33■■□□□ 1.17
HDAC11-205ENST00000404548 CALM3P0DP25 149 aa22.33■■□□□ 1.17
HDAC11-205ENST00000404548 MCM5P33992 734 aa22.33■■□□□ 1.17
HDAC11-205ENST00000404548 TRIM50Q86XT4 487 aa22.33■■□□□ 1.17
HDAC11-205ENST00000404548 LMBR1Q8WVP7 490 aa22.33■■□□□ 1.17
HDAC11-205ENST00000404548 C17orf80Q9BSJ5 609 aa22.33■■□□□ 1.17
HDAC11-205ENST00000404548 UBE2ZQ9H832 354 aaPredicted RBP22.33■■□□□ 1.17
HDAC11-205ENST00000404548 SH2B2O14492 632 aaPredicted RBP22.32■■□□□ 1.16
HDAC11-205ENST00000404548 PRC1O43663 620 aa22.32■■□□□ 1.16
HDAC11-205ENST00000404548 LIFRP42702 1097 aa22.32■■□□□ 1.16
HDAC11-205ENST00000404548 TAF2Q6P1X5 1199 aa22.32■■□□□ 1.16
HDAC11-205ENST00000404548 TEX2Q8IWB9 1127 aa22.32■■□□□ 1.16
HDAC11-205ENST00000404548 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
HDAC11-205ENST00000404548 MRPL38Q96DV4 380 aaKnown RBP22.32■■□□□ 1.16
HDAC11-205ENST00000404548 CTSHP09668 335 aa22.31■■□□□ 1.16
HDAC11-205ENST00000404548 PTPROQ16827 1216 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms