RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 DYDC2Q96IM9 177 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 PHACTR2O75167 634 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 KRT31Q15323 416 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 TCP11X2Q5H9J9 407 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 C7orf43Q8WVR3 580 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 EIF2AK1Q9BQI3 630 aaKnown RBP13.15□□□□□ -0.3
ATN1-202ENST00000396684 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 TCHHQ07283 1943 aa13.15□□□□□ -0.3
ATN1-202ENST00000396684 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
ATN1-202ENST00000396684 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 METTL14Q9HCE5 456 aaKnown RBP13.14□□□□□ -0.31
ATN1-202ENST00000396684 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 COASYQ13057 564 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
ATN1-202ENST00000396684 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
ATN1-202ENST00000396684 MOXD1Q6UVY6 613 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 SEPT9Q9UHD8 586 aaPredicted RBP13.14□□□□□ -0.31
ATN1-202ENST00000396684 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
ATN1-202ENST00000396684 WDR64B1ANS9 1081 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 SNHG28P0DPA3 235 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 VCAM1P19320 739 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 SREBF1P36956 1147 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 JAK3P52333 1124 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 KRT76Q01546 638 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 GPRC5DQ9NZD1 345 aa13.14□□□□□ -0.31
ATN1-202ENST00000396684 CASP14P31944 242 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 FMR1Q06787 632 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATN1-202ENST00000396684 DMP1Q13316 513 aaPredicted RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 STXBP2Q15833 593 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 MAN2A1Q16706 1144 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 VWA3BQ502W6 1294 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 CEP170P1Q96L14 293 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 STX10O60499 249 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 MIS18BP1Q6P0N0 1132 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 EEPD1Q7L9B9 569 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 KIAA1524Q8TCG1 905 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 MAP7D2Q96T17 732 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 RHOBTB3O94955 611 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 PSAPP07602 524 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 HARSP12081 509 aaKnown RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 DNA2P51530 1060 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 POLGP54098 1239 aaPredicted RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 FMNL3Q8IVF7 1028 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 ANKRD13AQ8IZ07 590 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 FNBP1Q96RU3 617 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 NLRC4Q9NPP4 1024 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 PPP1R9AQ9ULJ8 1098 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 P4HBP07237 508 aaKnown RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 ZNF569Q5MCW4 686 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 TEX35Q5T0J7 233 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 FAM160B1Q5W0V3 765 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 RRAGAQ7L523 313 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 GUF1Q8N442 669 aaKnown RBP13.13□□□□□ -0.31
ATN1-202ENST00000396684 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 IMPG2Q9BZV3 1241 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
ATN1-202ENST00000396684 FAM237AA0A1B0GTK4 181 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 FCER1AP12319 257 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 EPHA7Q15375 998 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 FASTKD5Q7L8L6 764 aaKnown RBP13.12□□□□□ -0.31
ATN1-202ENST00000396684 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 MTMR14Q8NCE2 650 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 NLGN2Q8NFZ4 835 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 JADE2Q9NQC1 790 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 NRBP2Q9NSY0 501 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 NFKBIEO00221 500 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 SLC26A4O43511 780 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 TACC1O75410 805 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 TEX2Q8IWB9 1127 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 LXNQ9BS40 222 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
ATN1-202ENST00000396684 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 H0YCG3 227 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 SFNP31947 248 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 PAFAH1B1P43034 410 aa13.12□□□□□ -0.31
ATN1-202ENST00000396684 QARSP47897 775 aaKnown RBP13.12□□□□□ -0.31
ATN1-202ENST00000396684 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms