RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TMEM59LQ9UK28 342 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 RCAN3Q9UKA8 241 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 TACC3Q9Y6A5 838 aa6□□□□□ -1.45
GABPB1-204ENST00000396464 NEMP1O14524 444 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ERC2O15083 957 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 KPNA6O60684 536 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 SNX2O60749 519 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 SETSIPP0DME0 302 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 GUCY2CP25092 1073 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 POLD1P28340 1107 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ID4P47928 161 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 CDK8P49336 464 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 NCAPHQ15003 741 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ELF2Q15723 593 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ARHGAP29Q52LW3 1261 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 DACT2Q5SW24 774 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 YOD1Q5VVQ6 348 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-204ENST00000396464 SLC6A19Q695T7 634 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 CFAP161Q6P656 301 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ATG14Q6ZNE5 492 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 POF1BQ8WVV4 589 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 TNIP3Q96KP6 325 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 CDC6Q99741 560 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ANTXR1Q9H6X2 564 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 EHMT1Q9H9B1 1298 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 CRTAC1Q9NQ79 661 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 MAN1C1Q9NR34 630 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ARHGEF4Q9NR80 690 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 GPATCH2Q9NW75 528 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 PCDHB14Q9Y5E9 798 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 TRBV23-1A0A0A0MS06 115 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 A0A1W2PRQ8 180 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 ASGR2P07307 311 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 LPOP22079 712 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-204ENST00000396464 NEK4P51957 841 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 TUBB8Q3ZCM7 444 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 LILRA6Q6PI73 481 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 FAM186BQ8IYM0 893 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 CBARPQ8N350 705 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-204ENST00000396464 KCNN1Q92952 543 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 USP7Q93009 1102 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 TMEM87BQ96K49 555 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 LRGUKQ96M69 825 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 TTC14Q96N46 770 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 EIF2AK1Q9BQI3 630 aaKnown RBP5.99□□□□□ -1.45
GABPB1-204ENST00000396464 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.99□□□□□ -1.45
GABPB1-204ENST00000396464 MTFR1LQ9H019 292 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 IFT22Q9H7X7 185 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 TRIM39Q9HCM9 518 aa5.99□□□□□ -1.45
GABPB1-204ENST00000396464 SAP30BPQ9UHR5 308 aaKnown RBP5.99□□□□□ -1.45
GABPB1-204ENST00000396464 A0A087WZG4 1122 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 A6NCN8 305 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 PRKD3O94806 890 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 SNUPNO95149 360 aaKnown RBP5.98□□□□□ -1.45
GABPB1-204ENST00000396464 RPN1P04843 607 aaKnown RBP5.98□□□□□ -1.45
GABPB1-204ENST00000396464 MYBL2P10244 700 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 TPP2P29144 1249 aaPredicted RBP5.98□□□□□ -1.45
GABPB1-204ENST00000396464 IARSP41252 1262 aaKnown RBP5.98□□□□□ -1.45
GABPB1-204ENST00000396464 CCT5P48643 541 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 ADCY1Q08828 1119 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 GRB10Q13322 594 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 ZNF460Q14592 562 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 KCNA10Q16322 511 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 RALGPS1Q5JS13 557 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 ARMC3Q5W041 872 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 LCNL1Q6ZST4 164 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 CILP2Q8IUL8 1156 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 MRPL41Q8IXM3 137 aaKnown RBP5.98□□□□□ -1.45
GABPB1-204ENST00000396464 CPA6Q8N4T0 437 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 PGBD4Q96DM1 585 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 TM9SF2Q99805 663 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 RIC8AQ9NPQ8 531 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 TJP2Q9UDY2 1190 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 KCNH3Q9ULD8 1083 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 APOBEC2Q9Y235 224 aaKnown RBP5.98□□□□□ -1.45
GABPB1-204ENST00000396464 ANKRD6Q9Y2G4 727 aa5.98□□□□□ -1.45
GABPB1-204ENST00000396464 TNPO3Q9Y5L0 923 aaKnown RBP5.98□□□□□ -1.45
GABPB1-204ENST00000396464 FZD9O00144 591 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 TGFB3P10600 412 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 BPIP17213 487 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 CYP2C19P33261 490 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 AK2P54819 239 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 EIF5P55010 431 aaKnown RBP5.97□□□□□ -1.45
GABPB1-204ENST00000396464 NUCB1Q02818 461 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 GTF2H3Q13889 308 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 TRIM14Q14142 442 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 ZYXQ15942 572 aaKnown RBP5.97□□□□□ -1.45
GABPB1-204ENST00000396464 LDHAL6AQ6ZMR3 332 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 RSRC2Q7L4I2 434 aaKnown RBP5.97□□□□□ -1.45
GABPB1-204ENST00000396464 C1QL4Q86Z23 238 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 OXR1Q8N573 874 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 IL17REQ8NFR9 667 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 FUBP3Q96I24 572 aaKnown RBP eCLIP5.97□□□□□ -1.45
GABPB1-204ENST00000396464 CDK5RAP3Q96JB5 506 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 MYD88Q99836 296 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 SLC13A1Q9BZW2 595 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 ADAMTS10Q9H324 1103 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 FNIP2Q9P278 1114 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 DUSP13Q9UII6 198 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms