RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 HAS3O00219 553 aa15.75■□□□□ 0.11
CXCL12-205ENST00000395794 EPB41L2O43491 1005 aaKnown RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 PARNO95453 639 aaKnown RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 FOSP01100 380 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 RPS6KB1P23443 525 aa15.75■□□□□ 0.11
CXCL12-205ENST00000395794 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 APOBRQ0VD83 1088 aa15.75■□□□□ 0.11
CXCL12-205ENST00000395794 GPRASP2Q96D09 838 aa15.75■□□□□ 0.11
CXCL12-205ENST00000395794 TTYH1Q9H313 450 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 TUT1Q9H6E5 874 aaKnown RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 RIC8AQ9NPQ8 531 aa15.75■□□□□ 0.11
CXCL12-205ENST00000395794 CXXC1Q9P0U4 656 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 ZNF215Q9UL58 517 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-205ENST00000395794 SCN10AQ9Y5Y9 1956 aa15.75■□□□□ 0.11
CXCL12-205ENST00000395794 LAMA2P24043 3122 aaKnown RBP15.74■□□□□ 0.11
CXCL12-205ENST00000395794 SMCO2A6NFE2 343 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 GRXCR1A8MXD5 290 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 MAFGO15525 162 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 LGALS2P05162 132 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 GNAT1P11488 350 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 SELPP16109 830 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 SP4Q02446 784 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 FUT2Q10981 343 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 PTK7Q13308 1070 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 MTMR1Q13613 665 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 LRRC8DQ7L1W4 858 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 GPR20Q99678 358 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 C16orf70Q9BSU1 422 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 PBX4Q9BYU1 374 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 ZNF576Q9H609 170 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 BARHL2Q9NY43 387 aa15.74■□□□□ 0.11
CXCL12-205ENST00000395794 C17orf102A2RUQ5 167 aa15.73■□□□□ 0.11
CXCL12-205ENST00000395794 CENPBP07199 599 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-205ENST00000395794 ATP2A2P16615 1042 aaKnown RBP15.73■□□□□ 0.11
CXCL12-205ENST00000395794 CDC27P30260 824 aa15.73■□□□□ 0.11
CXCL12-205ENST00000395794 ADD1P35611 737 aaKnown RBP15.73■□□□□ 0.11
CXCL12-205ENST00000395794 SEMA3FQ13275 785 aa15.73■□□□□ 0.11
CXCL12-205ENST00000395794 UTP14CQ5TAP6 766 aaKnown RBP15.73■□□□□ 0.11
CXCL12-205ENST00000395794 FBXL16Q8N461 479 aa15.73■□□□□ 0.11
CXCL12-205ENST00000395794 CCDC12Q8WUD4 166 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-205ENST00000395794 BCAS3Q9H6U6 928 aa15.73■□□□□ 0.11
CXCL12-205ENST00000395794 FAM217BQ9NTX9 383 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-205ENST00000395794 STXBP3O00186 592 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 CKBP12277 381 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 SCG2P13521 617 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 FOSL2P15408 326 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 ITGB5P18084 799 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 PBX2P40425 430 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 PFKFB3Q16875 520 aaPredicted RBP15.72■□□□□ 0.11
CXCL12-205ENST00000395794 MYLIPQ8WY64 445 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 ATP6V0A1Q93050 837 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 SLC28A3Q9HAS3 691 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 JADE2Q9NQC1 790 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 UBIAD1Q9Y5Z9 338 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 CYP46A1Q9Y6A2 500 aa15.72■□□□□ 0.11
CXCL12-205ENST00000395794 BAIAP3O94812 1187 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 SMIM10L2AP0DMW4 78 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 SMIM10L2BP0DMW5 78 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 ZNF76P36508 570 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 KCNJ6P48051 423 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 RBL2Q08999 1139 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 AP3B2Q13367 1082 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 MCTP2Q6DN12 878 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 RUFY3Q7L099 469 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 SEPT1Q8WYJ6 367 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 CTAGE1Q96RT6 745 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 C6orf50Q9HD87 102 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 PKD2L1Q9P0L9 805 aa15.71■□□□□ 0.11
CXCL12-205ENST00000395794 KIF28PB7ZC32 967 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 PRPF3O43395 683 aaKnown RBP15.7■□□□□ 0.1
CXCL12-205ENST00000395794 ATP9AO75110 1047 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 KCNA2P16389 499 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 TCF7P36402 384 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-205ENST00000395794 THPOP40225 353 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 ZNF200P98182 395 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-205ENST00000395794 GRIN2CQ14957 1233 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 TYW1BQ6NUM6 668 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 SERINC5Q86VE9 423 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 PHOSPHO2Q8TCD6 241 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 DHX38Q92620 1227 aaKnown RBP15.7■□□□□ 0.1
CXCL12-205ENST00000395794 GLG1Q92896 1179 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 SLC9A7Q96T83 725 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 MXRA8Q9BRK3 442 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 SDF4Q9BRK5 362 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 ANO3Q9BYT9 981 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 PCDHA11Q9Y5I1 949 aa15.7■□□□□ 0.1
CXCL12-205ENST00000395794 EMSYQ7Z589 1322 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 HAX1O00165 279 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 GNA11P29992 359 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 RABGGTBP53611 331 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 CEP55Q53EZ4 464 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 ZNF618Q5T7W0 954 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 TRIM50Q86XT4 487 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 MAFAQ8NHW3 353 aaPredicted RBP15.69■□□□□ 0.1
CXCL12-205ENST00000395794 BICD2Q8TD16 824 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
CXCL12-205ENST00000395794 VWCEQ96DN2 955 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 PGBD1Q96JS3 809 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms