RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 ZCWPW2Q504Y3 356 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 ASPRV1Q53RT3 343 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 HAUS3Q68CZ6 603 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 PRR5LQ6MZQ0 368 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 RIC8AQ9NPQ8 531 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 GGA1Q9UJY5 639 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 COL4A3BPQ9Y5P4 624 aa13.8□□□□□ -0.2
PPP3CB-204ENST00000394829 RGPD3A6NKT7 1758 aaPredicted RBP13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 RGPD4Q7Z3J3 1758 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 SLC16A2P36021 539 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 ITIH3Q06033 890 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 NELFCDQ8IXH7 590 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 RBM12Q9NTZ6 932 aaKnown RBP13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 PANK4Q9NVE7 773 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 DAGLAQ9Y4D2 1042 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 GAKO14976 1311 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 NPHP3-ACAD11A0A0J9YXS1 232 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 E9PMD0 336 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 DNA2P51530 1060 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 CCDC40Q4G0X9 1142 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 TSPYL1Q9H0U9 437 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 POLLQ9UGP5 575 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 POLR2FP61218 127 aaKnown RBP13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 FAM26FQ5R3K3 315 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 PPP4R3AQ6IN85 833 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 TSEN2Q8NCE0 465 aaKnown RBP13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 NOX5Q96PH1 765 aa13.79□□□□□ -0.2
PPP3CB-204ENST00000394829 GOLGB1Q14789 3259 aaKnown RBP13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 PNMA6FA0A0J9YX94 578 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 SSU72P8A0A1W2PR75 194 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 GOLGA6CA6NDK9 693 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 F8W031 263 aaPredicted RBP13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 MARCH6O60337 910 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 GOLGA6DP0CG33 693 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 GABPAQ06546 454 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 LSM14BQ9BX40 385 aaKnown RBP13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 GOLGA6AQ9NYA3 693 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 STIM2Q9P246 746 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 PLSCR1O15162 318 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 ATP2B4P23634 1241 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 ARID5AQ03989 594 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 ZNF543Q08ER8 600 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 SLC9C1Q4G0N8 1177 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 DDX4Q9NQI0 724 aaKnown RBP13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 CEP72Q9P209 647 aa13.78□□□□□ -0.2
PPP3CB-204ENST00000394829 PLIN4Q96Q06 1357 aa13.77□□□□□ -0.2
PPP3CB-204ENST00000394829 IGKV6D-41A0A0C4DH26 115 aa13.77□□□□□ -0.2
PPP3CB-204ENST00000394829 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.2
PPP3CB-204ENST00000394829 SFMBT2Q5VUG0 894 aa13.77□□□□□ -0.2
PPP3CB-204ENST00000394829 KCTD1Q719H9 257 aa13.77□□□□□ -0.2
PPP3CB-204ENST00000394829 KIAA1024Q9UPX6 916 aa13.77□□□□□ -0.2
PPP3CB-204ENST00000394829 USP17L10C9JJH3 530 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 RBAK-RBAKDNI3L0D1 243 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 GTF2IP78347 998 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 C8orf74Q6P047 294 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 TBC1D16Q8TBP0 767 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 CUL5Q93034 780 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 EDEM3Q9BZQ6 932 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 PPFIA4O75335 1185 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 PALMO75781 387 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 FTCDO95954 541 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 APBA3O96018 575 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 KLRC1P26715 233 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 TBC1D5Q92609 795 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 EHD4Q9H223 541 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 PACSIN2Q9UNF0 486 aaPredicted RBP13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 PCDHA2Q9Y5H9 948 aa13.77□□□□□ -0.21
PPP3CB-204ENST00000394829 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 ZSCAN5CA6NGD5 496 aaPredicted RBP13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 POTECB2RU33 542 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 TTLL1O95922 423 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 SERPING1P05155 500 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 RNF10Q8N5U6 811 aaKnown RBP13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 ANKRD31Q8N7Z5 1873 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 C6orf229H3BNL8 230 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 GLI1P08151 1106 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms