RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 OR52Z1P0C646 297 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 PPP2R2AP63151 447 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 MAN2A1Q16706 1144 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 PREPLQ4J6C6 727 aaPredicted RBP17.93■□□□□ 0.46
PHTF1-205ENST00000393357 CNNM4Q6P4Q7 775 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 PDXDC1Q6P996 788 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 ACSBG1Q96GR2 724 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 GDF3Q9NR23 364 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 USP54Q70EL1 1684 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 FRMPD2Q68DX3 1309 aaPredicted RBP17.93■□□□□ 0.46
PHTF1-205ENST00000393357 CALML3P27482 149 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 CDC37Q16543 378 aaPredicted RBP17.93■□□□□ 0.46
PHTF1-205ENST00000393357 COA7Q96BR5 231 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
PHTF1-205ENST00000393357 GRID2IPA4D2P6 1211 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 CLGNO14967 610 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 TSPY3P0CV98 308 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 TSPY8P0CW00 308 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 EPB41P11171 864 aaKnown RBP17.93■□□□□ 0.46
PHTF1-205ENST00000393357 KCNMA1Q12791 1236 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 ARFGAP2Q8N6H7 521 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 ANKRD42Q8N9B4 389 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 NOD2Q9HC29 1040 aa17.93■□□□□ 0.46
PHTF1-205ENST00000393357 MYH2Q9UKX2 1941 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 LMO7Q8WWI1 1683 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 PCDH11XQ9BZA7 1347 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 PCDH11YQ9BZA8 1340 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 TDP2O95551 362 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 KIF5BP33176 963 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 AADACL2Q6P093 401 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 PEX26Q7Z412 305 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 CCDC63Q8NA47 563 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 DDX12PQ92771 950 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 ERGIC2Q96RQ1 377 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 SNX24Q9Y343 169 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.92■□□□□ 0.46
PHTF1-205ENST00000393357 SPDYE3A6NKU9 549 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 CYTH3O43739 400 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 BIRC2Q13490 618 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 BAP1Q92560 729 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 ADAM33Q9BZ11 813 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 TRIM6Q9C030 488 aaPredicted RBP17.92■□□□□ 0.46
PHTF1-205ENST00000393357 YIPF3Q9GZM5 350 aa17.92■□□□□ 0.46
PHTF1-205ENST00000393357 DIAPH2O60879 1101 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 MMEP08473 750 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CALM1P0DP23 149 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CALM2P0DP24 149 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CALM3P0DP25 149 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 SLC9A1P19634 815 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 FGFR2P21802 821 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CLEC10AQ8IUN9 316 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 PRMT1Q99873 361 aaKnown RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 PYM1Q9BRP8 204 aaKnown RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 TRIM33Q9UPN9 1127 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 NOC2LQ9Y3T9 749 aaKnown RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 MROH5Q6ZUA9 1318 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 A0A1B0GUA9 196 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 IL2RBP14784 551 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CHN1P15882 459 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CCNHP51946 323 aaPredicted RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 IFI35P80217 286 aaPredicted RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 SLC17A8Q8NDX2 589 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 KIF9Q9HAQ2 790 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 DBR1Q9UK59 544 aaKnown RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 PTPN22Q9Y2R2 807 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 CHRM1P11229 460 aaPredicted RBP17.91■□□□□ 0.46
PHTF1-205ENST00000393357 FBXO3Q9UK99 471 aa17.91■□□□□ 0.46
PHTF1-205ENST00000393357 LGR5O75473 907 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 FGGP02679 453 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 AMPD3Q01432 767 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 PTK2Q05397 1052 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 KCNB1Q14721 858 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 DIXDC1Q155Q3 683 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 ASIC2Q16515 512 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 ARL6IP4Q66PJ3 421 aaKnown RBP17.9■□□□□ 0.46
PHTF1-205ENST00000393357 HGSNATQ68CP4 663 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 SPICE1Q8N0Z3 855 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 METTL13Q8N6R0 699 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 U2AF1L4Q8WU68 220 aaKnown RBP17.9■□□□□ 0.46
PHTF1-205ENST00000393357 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
PHTF1-205ENST00000393357 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 TRAPPC3O43617 180 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 KCNJ2P63252 427 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 MECOMQ03112 1051 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 HERC4Q5GLZ8 1057 aaPredicted RBP17.9■□□□□ 0.46
PHTF1-205ENST00000393357 TMED8Q6PL24 325 aaPredicted RBP17.9■□□□□ 0.46
PHTF1-205ENST00000393357 GDAP1Q8TB36 358 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 WHAMMQ8TF30 809 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 SPIRE2Q8WWL2 714 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 GPR101Q96P66 508 aaPredicted RBP17.9■□□□□ 0.46
PHTF1-205ENST00000393357 TSG101Q99816 390 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 PAIP2Q9BPZ3 127 aaKnown RBP17.9■□□□□ 0.46
PHTF1-205ENST00000393357 IKZF4Q9H2S9 585 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 AZI2Q9H6S1 392 aa17.9■□□□□ 0.46
PHTF1-205ENST00000393357 DCP1AQ9NPI6 582 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms