RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 VGLL4Q14135 290 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 GRAMD1CQ8IYS0 662 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 CNNM3Q8NE01 707 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 LPAR1Q92633 364 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 GJA10Q969M2 543 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 WNK4Q96J92 1243 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 UIMC1Q96RL1 719 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 TANGO6Q9C0B7 1094 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 ODF2LQ9ULJ1 636 aa21.07■□□□□ 0.96
CCDC50-202ENST00000392456 WDR46O15213 610 aaKnown RBP21.06■□□□□ 0.96
CCDC50-202ENST00000392456 RPS6KA3P51812 740 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 PNOCQ13519 176 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 USP50Q70EL3 339 aaPredicted RBP21.06■□□□□ 0.96
CCDC50-202ENST00000392456 PARD6BQ9BYG5 372 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 TAF1DQ9H5J8 278 aaPredicted RBP21.06■□□□□ 0.96
CCDC50-202ENST00000392456 RPAP3Q9H6T3 665 aaPredicted RBP21.06■□□□□ 0.96
CCDC50-202ENST00000392456 DOCK1Q14185 1865 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 ZNF536O15090 1300 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 CHUKO15111 745 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 AP1G2O75843 785 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 CAVIN2O95810 425 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 ARL6IP4Q66PJ3 421 aaKnown RBP21.06■□□□□ 0.96
CCDC50-202ENST00000392456 FAM160B2Q86V87 743 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 MICAL1Q8TDZ2 1067 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 KIAA1468Q9P260 1216 aa21.06■□□□□ 0.96
CCDC50-202ENST00000392456 ETF1P62495 437 aaKnown RBP21.05■□□□□ 0.96
CCDC50-202ENST00000392456 DNAI1Q9UI46 699 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 SNCAIPQ9Y6H5 919 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 BIN1O00499 593 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 FLOT1O75955 427 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 ISM2Q6H9L7 571 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 LDHDQ86WU2 507 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 DHX58Q96C10 678 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 SLF1Q9BQI6 1058 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 MYH7BA7E2Y1 1941 aa21.05■□□□□ 0.96
CCDC50-202ENST00000392456 CCDC151A5D8V7 595 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 ACTN4O43707 911 aaKnown RBP21.04■□□□□ 0.96
CCDC50-202ENST00000392456 FAM163BP0C2L3 166 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 RDXP35241 583 aaKnown RBP21.04■□□□□ 0.96
CCDC50-202ENST00000392456 MDM2Q00987 491 aaPredicted RBP21.04■□□□□ 0.96
CCDC50-202ENST00000392456 FMR1Q06787 632 aaKnown RBP eCLIP21.04■□□□□ 0.96
CCDC50-202ENST00000392456 TBC1D25Q3MII6 688 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 WLSQ5T9L3 541 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 DTHD1Q6ZMT9 781 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 ANO3Q9BYT9 981 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 AFG3L2Q9Y4W6 797 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 SNUPNO95149 360 aaKnown RBP21.04■□□□□ 0.96
CCDC50-202ENST00000392456 PSMD2Q13200 908 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 SLC5A9Q2M3M2 681 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 CPXCR1Q8N123 301 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 CDCA5Q96FF9 252 aa21.04■□□□□ 0.96
CCDC50-202ENST00000392456 N4BP1O75113 896 aaKnown RBP21.03■□□□□ 0.96
CCDC50-202ENST00000392456 CFBP00751 764 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 MAP3K9P80192 1104 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 NOL9Q5SY16 702 aaKnown RBP21.03■□□□□ 0.96
CCDC50-202ENST00000392456 DNAJC14Q6Y2X3 702 aaPredicted RBP21.03■□□□□ 0.96
CCDC50-202ENST00000392456 C11orf57Q6ZUT1 292 aaPredicted RBP21.03■□□□□ 0.96
CCDC50-202ENST00000392456 RSRC2Q7L4I2 434 aaKnown RBP21.03■□□□□ 0.96
CCDC50-202ENST00000392456 PIK3R5Q8WYR1 880 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 CLMNQ96JQ2 1002 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 OR52Z1P0C646 297 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 MTMR9Q96QG7 549 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 CD248Q9HCU0 757 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 FAM169AQ9Y6X4 670 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 PHIPQ8WWQ0 1821 aa21.03■□□□□ 0.96
CCDC50-202ENST00000392456 CASP1P29466 404 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 TECP42680 631 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 KCNJ6P48051 423 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 IQCB1Q15051 598 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 RBBP5Q15291 538 aaKnown RBP21.02■□□□□ 0.96
CCDC50-202ENST00000392456 TRIM74Q86UV6 250 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 TRIM73Q86UV7 250 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 AS3MTQ9HBK9 375 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 RAVER2Q9HCJ3 691 aaKnown RBP21.02■□□□□ 0.96
CCDC50-202ENST00000392456 NEFHP12036 1026 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 TXKP42681 527 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 USP14P54578 494 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 BRD3Q15059 726 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 CRYGNQ8WXF5 182 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 STAMQ92783 540 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 PPP1R9AQ9ULJ8 1098 aa21.02■□□□□ 0.96
CCDC50-202ENST00000392456 PPP1R12BO60237 982 aaPredicted RBP21.01■□□□□ 0.95
CCDC50-202ENST00000392456 LONP1P36776 959 aaKnown RBP21.01■□□□□ 0.95
CCDC50-202ENST00000392456 KARSQ15046 597 aaKnown RBP21.01■□□□□ 0.95
CCDC50-202ENST00000392456 LRRC15Q8TF66 581 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 ZC3H15Q8WU90 426 aaKnown RBP21.01■□□□□ 0.95
CCDC50-202ENST00000392456 ATG4CQ96DT6 458 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 PLIN2Q99541 437 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 SLC38A10Q9HBR0 1119 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 EIF3JO75822 258 aaKnown RBP21.01■□□□□ 0.95
CCDC50-202ENST00000392456 URI1O94763 535 aaPredicted RBP21.01■□□□□ 0.95
CCDC50-202ENST00000392456 PPP4R3AQ6IN85 833 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 RABGGTAQ92696 567 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 HAS1Q92839 578 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 GLT8D2Q9H1C3 349 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 CCPG1Q9ULG6 757 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 PCDHA5Q9Y5H7 936 aa21.01■□□□□ 0.95
CCDC50-202ENST00000392456 ICAM1P05362 532 aa21■□□□□ 0.95
CCDC50-202ENST00000392456 PRPHP41219 470 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms