RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 DCCP43146 1447 aa21.37■■□□□ 1.01
SHANK1-203ENST00000391813 SOS2Q07890 1332 aaPredicted RBP21.36■■□□□ 1.01
SHANK1-203ENST00000391813 STK17AQ9UEE5 414 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 KCNG1Q9UIX4 513 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 RIMS1Q86UR5 1692 aaKnown RBP21.36■■□□□ 1.01
SHANK1-203ENST00000391813 USP17L12C9JPN9 530 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 USP17L21D6R901 530 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 CHMP2AO43633 222 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 VSNL1P62760 191 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.36■■□□□ 1.01
SHANK1-203ENST00000391813 CCDC17Q96LX7 622 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.36■■□□□ 1.01
SHANK1-203ENST00000391813 LGALS16A8MUM7 142 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 BACH1O14867 736 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 PNMA1Q8ND90 353 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 LARP4BQ92615 738 aaKnown RBP21.36■■□□□ 1.01
SHANK1-203ENST00000391813 WDR24Q96S15 920 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 NDST4Q9H3R1 872 aa21.36■■□□□ 1.01
SHANK1-203ENST00000391813 ESRRGP62508 458 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 PPP2R2AP63151 447 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 MYO1EQ12965 1108 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 SUPT20HL1Q3ZLR7 823 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 TMTC3Q6ZXV5 915 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 SPDL1Q96EA4 605 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 ATP6V1G3Q96LB4 118 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 PIK3C2BO00750 1634 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 SH2B2O14492 632 aaPredicted RBP21.35■■□□□ 1.01
SHANK1-203ENST00000391813 ZNF148Q9UQR1 794 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 NEXMIFQ5QGS0 1516 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 ARL6IP4Q66PJ3 421 aaKnown RBP21.35■■□□□ 1.01
SHANK1-203ENST00000391813 SMCR8Q8TEV9 937 aaPredicted RBP21.35■■□□□ 1.01
SHANK1-203ENST00000391813 FGFR1OP2Q9NVK5 253 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 PPP1R37O75864 691 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 BTDP43251 543 aa21.35■■□□□ 1.01
SHANK1-203ENST00000391813 DIS3Q9Y2L1 958 aaKnown RBP21.35■■□□□ 1.01
SHANK1-203ENST00000391813 POC1B-GALNT4F8VUJ3 575 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 ELF1P32519 619 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 CORO7P57737 925 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 DR1Q01658 176 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 PRKG1Q13976 671 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 TMED8Q6PL24 325 aaPredicted RBP21.34■■□□□ 1.01
SHANK1-203ENST00000391813 NYAP1Q6ZVC0 841 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.34■■□□□ 1.01
SHANK1-203ENST00000391813 YIPF3Q9GZM5 350 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 SPATA31A1Q5TZJ5 1347 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 COL15A1P39059 1388 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 ZWINTO95229 277 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 BSDC1Q9NW68 430 aaPredicted RBP21.34■■□□□ 1.01
SHANK1-203ENST00000391813 COBLO75128 1261 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 RASA3Q14644 834 aa21.34■■□□□ 1.01
SHANK1-203ENST00000391813 PODXLO00592 558 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 LRRC63Q05C16 580 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 SUSD4Q5VX71 490 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 CASC4Q6P4E1 433 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 SLFN12Q8IYM2 578 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 HNRNPLLQ8WVV9 542 aaKnown RBP21.33■■□□□ 1.01
SHANK1-203ENST00000391813 COA1Q9GZY4 146 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 REREQ9P2R6 1566 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 NR5A1Q13285 461 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 FAM47AQ5JRC9 791 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 SUFUQ9UMX1 484 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.33■■□□□ 1.01
SHANK1-203ENST00000391813 H7C1W4 665 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 RNF8O76064 485 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 ZYXQ15942 572 aaKnown RBP21.33■■□□□ 1.01
SHANK1-203ENST00000391813 L2HGDHQ9H9P8 463 aa21.33■■□□□ 1.01
SHANK1-203ENST00000391813 CRCPO75575 148 aa21.33■■□□□ 1
SHANK1-203ENST00000391813 CYP19A1P11511 503 aaPredicted RBP21.33■■□□□ 1
SHANK1-203ENST00000391813 PHKA1P46020 1223 aa21.33■■□□□ 1
SHANK1-203ENST00000391813 ARHGAP18Q8N392 663 aa21.33■■□□□ 1
SHANK1-203ENST00000391813 GIPC1O14908 333 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 EIF3HO15372 352 aaKnown RBP eCLIP21.32■■□□□ 1
SHANK1-203ENST00000391813 AFPP02771 609 aaKnown RBP21.32■■□□□ 1
SHANK1-203ENST00000391813 DDIT3P35638 169 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 CYP2J2P51589 502 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 BFSP1Q12934 665 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 PSMD2Q13200 908 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 YY1AP1Q9H869 796 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 MYO1FO00160 1098 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 SLCO1A2P46721 670 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 MESDQ14696 234 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 ARHGEF6Q15052 776 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 HADHQ16836 314 aaKnown RBP21.32■■□□□ 1
SHANK1-203ENST00000391813 TECPR2O15040 1411 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 GRID2IPA4D2P6 1211 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 INHBAP08476 426 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 STMN1P16949 149 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 NR2F2P24468 414 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 SCNN1DP51172 638 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 PCDHB6Q9Y5E3 794 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 SRGAP2O75044 1071 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 RC3H1Q5TC82 1133 aaKnown RBP21.32■■□□□ 1
SHANK1-203ENST00000391813 CIAPIN1Q6FI81 312 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 SEC31BQ9NQW1 1179 aa21.32■■□□□ 1
SHANK1-203ENST00000391813 GPHNQ9NQX3 736 aaPredicted RBP21.32■■□□□ 1
SHANK1-203ENST00000391813 ANKRD20A4Q4UJ75 823 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 SGO2Q562F6 1265 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 ANKRD20A8PQ5CZ79 823 aa21.31■■□□□ 1
SHANK1-203ENST00000391813 ANKRD20A2Q5SQ80 823 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms