RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ECE1P42892 770 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 GPSM2P81274 684 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 SNRNP48Q6IEG0 339 aaKnown RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 PODNQ7Z5L7 613 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 SIX6OS1Q8N1H7 587 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 FEM1BQ9UK73 627 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 GOLGA8IPA6NC78 632 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 GOLGA8JA6NMD2 632 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 CASP14P31944 242 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 EHHADHQ08426 723 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 STXBP2Q15833 593 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 TXNRD1Q16881 649 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 HEXIM2Q96MH2 286 aaKnown RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 EMILIN3Q9NT22 766 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 GCNT4Q9P109 453 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 ARHGAP31Q2M1Z3 1444 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 KCNQ2O43526 872 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 IGSF3O75054 1194 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 CYP19A1P11511 503 aaPredicted RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 ANKRD20A3Q5VUR7 823 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 CATSPER4Q7RTX7 472 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 UHMK1Q8TAS1 419 aaKnown RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 EPN1Q9Y6I3 576 aaPredicted RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 PHLDB2Q86SQ0 1253 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 CHAMP1Q96JM3 812 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 IFT122Q9HBG6 1241 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 BUB1BO60566 1050 aaPredicted RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 SRGAP2BP0DMP2 458 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 GARSP41250 739 aaKnown RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 PARD3BQ8TEW8 1205 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 STRBPQ96SI9 672 aaKnown RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 PCDHA6Q9UN73 950 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 MAGED2Q9UNF1 606 aaPredicted RBP14.8□□□□□ -0.04
GPC6-201ENST00000377047 PCDHA8Q9Y5H6 950 aa14.8□□□□□ -0.04
GPC6-201ENST00000377047 MTMR1Q13613 665 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 OR6B2Q6IFH4 312 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 RMDN3Q96TC7 470 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 PCDHB6Q9Y5E3 794 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 TET3O43151 1660 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 K7ERI5 159 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 ATXN8OSP0DMR3 200 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 YWHAGP61981 247 aaKnown RBP eCLIP14.79□□□□□ -0.04
GPC6-201ENST00000377047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.79□□□□□ -0.04
GPC6-201ENST00000377047 S100BP04271 92 aaPredicted RBP14.79□□□□□ -0.04
GPC6-201ENST00000377047 PPFIA1Q13136 1202 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 SEPT2Q15019 361 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 OTUD5Q96G74 571 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 FAM81BQ96LP2 452 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 MAN1B1Q9UKM7 699 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 GFPT2O94808 682 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 MAN2A1Q16706 1144 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 TSC1Q92574 1164 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.79□□□□□ -0.04
GPC6-201ENST00000377047 RPAP1Q9BWH6 1393 aaPredicted RBP14.79□□□□□ -0.04
GPC6-201ENST00000377047 TROVE2P10155 538 aaKnown RBP eCLIP14.79□□□□□ -0.04
GPC6-201ENST00000377047 GNAT1P11488 350 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 EEF1GP26641 437 aaKnown RBP14.79□□□□□ -0.04
GPC6-201ENST00000377047 PEX3P56589 373 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 RNF139Q8WU17 664 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 TCP11Q8WWU5 503 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 PTCH1Q13635 1447 aa14.79□□□□□ -0.04
GPC6-201ENST00000377047 CPDO75976 1380 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 GPT2Q8TD30 523 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 AIFM3Q96NN9 605 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 FBXO40Q9UH90 709 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 POLIQ9UNA4 740 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 SETD1BQ9UPS6 1966 aaKnown RBP14.78□□□□□ -0.04
GPC6-201ENST00000377047 PASKQ96RG2 1323 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 TCP1P17987 556 aaKnown RBP14.78□□□□□ -0.04
GPC6-201ENST00000377047 FKBP3Q00688 224 aaKnown RBP14.78□□□□□ -0.04
GPC6-201ENST00000377047 DNAJC24Q6P3W2 148 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 KSR1Q8IVT5 923 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 TRMT2AQ8IZ69 625 aaKnown RBP14.78□□□□□ -0.04
GPC6-201ENST00000377047 CDKL2Q92772 493 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 ACTN1P12814 892 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 JAK3P52333 1124 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 SURF1Q15526 300 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 SLFNL1Q499Z3 407 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 ARHGAP24Q8N264 748 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 SMYD2Q9NRG4 433 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 SFI1A8K8P3 1242 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 CYP2E1P05181 493 aaPredicted RBP14.78□□□□□ -0.04
GPC6-201ENST00000377047 ARL4AP40617 200 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 DYNLT1P63172 113 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 BBOF1Q8ND07 529 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 NUF2Q9BZD4 464 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 INPP5FQ9Y2H2 1132 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 USP17L10C9JJH3 530 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 KRT1P04264 644 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 LIFRP42702 1097 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 ELMSAN1Q6PJG2 1045 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 CACNA2D3Q8IZS8 1091 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 FAM133AQ8N9E0 248 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 ABCB11O95342 1321 aa14.78□□□□□ -0.04
GPC6-201ENST00000377047 TTC31Q49AM3 519 aaPredicted RBP14.77□□□□□ -0.04
GPC6-201ENST00000377047 BANK1Q8NDB2 785 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms