RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RPAINQ86UA6 219 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 CADPS2Q86UW7 1296 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 KANSL2Q9H9L4 492 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 ADAMTS1Q9UHI8 967 aa18.15■□□□□ 0.5
TRIM39-201ENST00000376656 KIAA1551Q9HCM1 1747 aa18.14■□□□□ 0.5
TRIM39-201ENST00000376656 BCL9O00512 1426 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 GOLGA6L7A0A1B0GV03 622 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 NTSR2O95665 410 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 KLRK1P26718 216 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 CTNNA1P35221 906 aaKnown RBP18.14■□□□□ 0.49
TRIM39-201ENST00000376656 GNAQP50148 359 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 SLC18A3Q16572 532 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 SBK1Q52WX2 424 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 NEK8Q86SG6 692 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 HAUS2Q9NVX0 235 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 CEP83Q9Y592 693 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 TAF1P21675 1872 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 PVALEFA0A1B0GWK0 134 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 PRDX5P30044 214 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 RAPGEF1Q13905 1077 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 KRT25Q7Z3Z0 450 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 FAM228AQ86W67 206 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 LARP4BQ92615 738 aaKnown RBP18.14■□□□□ 0.49
TRIM39-201ENST00000376656 ZMYND12Q9H0C1 365 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 ACTR5Q9H9F9 607 aaPredicted RBP18.14■□□□□ 0.49
TRIM39-201ENST00000376656 LEMD3Q9Y2U8 911 aa18.14■□□□□ 0.49
TRIM39-201ENST00000376656 FLT3P36888 993 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 BYSLQ13895 437 aaKnown RBP18.13■□□□□ 0.49
TRIM39-201ENST00000376656 UBE4AQ14139 1066 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 CYB5D1Q6P9G0 228 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 FUKQ8N0W3 1084 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 LUC7LQ9NQ29 371 aaKnown RBP18.13■□□□□ 0.49
TRIM39-201ENST00000376656 ANKRD20A8PQ5CZ79 823 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 PARP9Q8IXQ6 854 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 TAF4BQ92750 862 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 SEC16BQ96JE7 1060 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 AP1M1Q9BXS5 423 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 NIP7Q9Y221 180 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRIM39-201ENST00000376656 SMCO2A6NFE2 343 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 C21orf2O43822 256 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 ATP2C2O75185 946 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 FAM133AQ8N9E0 248 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 TBCKQ8TEA7 893 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 SYN2Q92777 582 aaPredicted RBP18.13■□□□□ 0.49
TRIM39-201ENST00000376656 DCCP43146 1447 aa18.13■□□□□ 0.49
TRIM39-201ENST00000376656 MYH4Q9Y623 1939 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 DCDC2CA8MYV0 355 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 ELF1P32519 619 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 ODF2Q5BJF6 829 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 WLSQ5T9L3 541 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 CEP57Q86XR8 500 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 DNAAF5Q86Y56 855 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 RAPGEF5Q92565 580 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 ANKS1AQ92625 1134 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 TSG101Q99816 390 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 COL4A3BPQ9Y5P4 624 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 RPS6KA1Q15418 735 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 SNCBQ16143 134 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 C3orf67Q6ZVT6 689 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 UBLCP1Q8WVY7 318 aaPredicted RBP18.12■□□□□ 0.49
TRIM39-201ENST00000376656 NUCKS1Q9H1E3 243 aaKnown RBP18.12■□□□□ 0.49
TRIM39-201ENST00000376656 FBXL5Q9UKA1 691 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 NOVA2Q9UNW9 492 aaKnown RBP18.12■□□□□ 0.49
TRIM39-201ENST00000376656 JAG2Q9Y219 1238 aa18.12■□□□□ 0.49
TRIM39-201ENST00000376656 TRAF5O00463 557 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 CEP104O60308 925 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 KLHL30Q0D2K2 578 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 CUL1Q13616 776 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 KCNK18Q7Z418 384 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 DDX12PQ92771 950 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 N4BP2L2Q92802 583 aaPredicted RBP18.11■□□□□ 0.49
TRIM39-201ENST00000376656 LRRC45Q96CN5 670 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 NUDT12Q9BQG2 462 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 LRRC4CQ9HCJ2 640 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 CCDC88AQ3V6T2 1871 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 PHLPP1O60346 1717 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 PALM3A6NDB9 673 aaPredicted RBP18.11■□□□□ 0.49
TRIM39-201ENST00000376656 PPP2R2AP63151 447 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRIM39-201ENST00000376656 CDK5RAP3Q96JB5 506 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 BIN2Q9UBW5 565 aaPredicted RBP18.11■□□□□ 0.49
TRIM39-201ENST00000376656 STK17AQ9UEE5 414 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 ODF2LQ9ULJ1 636 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 STX8Q9UNK0 236 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 KLRF2D3W0D1 207 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 KIF4AO95239 1232 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 TACO1Q9BSH4 297 aaKnown RBP18.11■□□□□ 0.49
TRIM39-201ENST00000376656 DDX47Q9H0S4 455 aaKnown RBP18.11■□□□□ 0.49
TRIM39-201ENST00000376656 TMEM260Q9NX78 707 aa18.11■□□□□ 0.49
TRIM39-201ENST00000376656 TPX2Q9ULW0 747 aaKnown RBP18.11■□□□□ 0.49
TRIM39-201ENST00000376656 POTEMA6NI47 508 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 CAMTA2O94983 1202 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 NF2P35240 595 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 BIRC3Q13489 604 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 SART1O43290 800 aaKnown RBP18.1■□□□□ 0.49
TRIM39-201ENST00000376656 SCP2P22307 547 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 SCTRP47872 440 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms