RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 VSTM4Q8IW00 320 aa19.67■□□□□ 0.74
PTPDC1-202ENST00000375360 RIOK1Q9BRS2 568 aaKnown RBP19.67■□□□□ 0.74
PTPDC1-202ENST00000375360 TRIM58Q8NG06 486 aa19.67■□□□□ 0.74
PTPDC1-202ENST00000375360 ASIC3Q9UHC3 531 aa19.67■□□□□ 0.74
PTPDC1-202ENST00000375360 EHHADHQ08426 723 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 C16orf86Q6ZW13 317 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 HPS3Q969F9 1004 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 NAP1L3Q99457 506 aaPredicted RBP19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 SELENOSQ9BQE4 189 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 SPTLC3Q9NUV7 552 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 ZNF70Q9UC06 446 aaPredicted RBP19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 FEM1BQ9UK73 627 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 PDHBP11177 359 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 CAPN2P17655 700 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 ATP2C1P98194 919 aaPredicted RBP19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 SLC35F6Q8N357 371 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 PPP1R13BQ96KQ4 1090 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 AFPP02771 609 aaKnown RBP19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 TUBBP07437 444 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 NAA35Q5VZE5 725 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 RSBN1LQ6PCB5 846 aaPredicted RBP19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 PRMT6Q96LA8 375 aaPredicted RBP19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 SPZ1Q9BXG8 430 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 HOXC10Q9NYD6 342 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 KIF20BQ96Q89 1820 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 SRGNP10124 158 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 MYL7Q01449 175 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 MIS18BP1Q6P0N0 1132 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 HDXQ7Z353 690 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 SFR1Q86XK3 245 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 FAM133AQ8N9E0 248 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 IQCDQ96DY2 449 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 DYDC2Q96IM9 177 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 SPON1Q9HCB6 807 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 AMFRQ9UKV5 643 aa19.66■□□□□ 0.74
PTPDC1-202ENST00000375360 TCP11X2Q5H9J9 407 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 CCDC105Q8IYK2 499 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 PHF20Q9BVI0 1012 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 FBXO2Q9UK22 296 aaPredicted RBP19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 MTMR2Q13614 643 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 ZNF668Q96K58 619 aaPredicted RBP19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 ACCSQ96QU6 501 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 H0YCG3 227 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 PPP1R14CQ8TAE6 165 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 RGL1Q9NZL6 768 aa19.65■□□□□ 0.74
PTPDC1-202ENST00000375360 IPO5O00410 1097 aaKnown RBP19.64■□□□□ 0.74
PTPDC1-202ENST00000375360 VPS41P49754 854 aa19.64■□□□□ 0.74
PTPDC1-202ENST00000375360 UNC13DQ70J99 1090 aa19.64■□□□□ 0.74
PTPDC1-202ENST00000375360 ZBTB33Q86T24 672 aa19.64■□□□□ 0.74
PTPDC1-202ENST00000375360 NLRP4Q96MN2 994 aa19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 IQCGQ9H095 443 aaKnown RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 TNS2Q63HR2 1409 aa19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 KIF4AO95239 1232 aa19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 TNNC2P02585 160 aa19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 TFAMQ00059 246 aaKnown RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 GRIN1Q05586 938 aa19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 ANGEL2Q5VTE6 544 aaKnown RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 SND1Q7KZF4 910 aaKnown RBP eCLIP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 METTL16Q86W50 562 aaKnown RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 GFPT2O94808 682 aa19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 HPDP32754 393 aaPredicted RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 IRX5P78411 483 aaPredicted RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 RPAP3Q9H6T3 665 aaPredicted RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 GCNT4Q9P109 453 aa19.64■□□□□ 0.73
PTPDC1-202ENST00000375360 NT5C1BQ96P26 610 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 IFNB1P01574 187 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 PPP2R5AQ15172 486 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 KCNK9Q9NPC2 374 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 N4BP1O75113 896 aaKnown RBP19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 FCER1AP12319 257 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 TUBB2AQ13885 445 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 SYCE1Q8N0S2 351 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 OTUD6BQ8N6M0 293 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 FAM20AQ96MK3 541 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 TUBB2BQ9BVA1 445 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 ADAMTS1Q9UHI8 967 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 ABT1Q9ULW3 272 aaKnown RBP19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 K7ERI5 159 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 PSAPP07602 524 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 CDC25BP30305 580 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 PPP4CP60510 307 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 LONRF2Q1L5Z9 754 aa19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 DDX41Q9UJV9 622 aaKnown RBP19.63■□□□□ 0.73
PTPDC1-202ENST00000375360 GMPSP49915 693 aaPredicted RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 UTP11Q9Y3A2 253 aaKnown RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 TEX33O43247 280 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 PIK3CAP42336 1068 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 PDE6CP51160 858 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 PSMD2Q13200 908 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 NSUN6Q8TEA1 469 aaKnown RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 RABEP2Q9H5N1 569 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 NXF1Q9UBU9 619 aaKnown RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 RSPH14Q9UHP6 348 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 DAPK3O43293 454 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 ACTN4O43707 911 aaKnown RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 EIF4A3P38919 411 aaKnown RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 LACTBP83111 547 aaPredicted RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 UAP1Q16222 522 aaPredicted RBP19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 PADI6Q6TGC4 694 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms