RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TRDNQ13061 729 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 TRAF1Q13077 416 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 PLEKHG4Q58EX7 1191 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 MYOCDQ8IZQ8 938 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 KHSRPQ92945 711 aaKnown RBP eCLIP15.97■□□□□ 0.15
CXCL12-202ENST00000374426 INPP4AQ96PE3 977 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-202ENST00000374426 C17orf80Q9BSJ5 609 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 OSBPL7Q9BZF2 842 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 TAF6LQ9Y6J9 622 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 MICAL3Q7RTP6 2002 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 TREHO43280 583 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 AMHP03971 560 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 ICAM3P32942 547 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 PLA2G5P39877 138 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 PTH1RQ03431 593 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 SEMA3FQ13275 785 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-202ENST00000374426 RNPEPQ9H4A4 650 aa15.96■□□□□ 0.15
CXCL12-202ENST00000374426 UBE2ZQ9H832 354 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-202ENST00000374426 U3KPZ7 1027 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-202ENST00000374426 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-202ENST00000374426 SPATA31C2B4DYI2 1134 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 NOP56O00567 594 aaKnown RBP15.95■□□□□ 0.14
CXCL12-202ENST00000374426 WTAPQ15007 396 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 GNPTABQ3T906 1256 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 METTL7BQ6UX53 244 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 CYFIP1Q7L576 1253 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 FBXO22Q8NEZ5 403 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 LRFN3Q9BTN0 628 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 USP26Q9BXU7 913 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 CD320Q9NPF0 282 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 TELO2Q9Y4R8 837 aa15.95■□□□□ 0.14
CXCL12-202ENST00000374426 PIEZO1Q92508 2521 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 ERICH2A1L162 156 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 E7EWF7 191 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 CAND2O75155 1236 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 STAM2O75886 525 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 CTSHP09668 335 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 NEDD9Q14511 834 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 RALYLQ86SE5 291 aaKnown RBP15.94■□□□□ 0.14
CXCL12-202ENST00000374426 TRIM50Q86XT4 487 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 SEPT8Q92599 483 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 GPR20Q99678 358 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 SETD4Q9NVD3 440 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 RTEL1Q9NZ71 1219 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 MYO7AQ13402 2215 aa15.94■□□□□ 0.14
CXCL12-202ENST00000374426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.93■□□□□ 0.14
CXCL12-202ENST00000374426 FIBPO43427 364 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 KCNA5P22460 613 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 CHMLP26374 656 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 ANTXR2P58335 489 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 ADAM17P78536 824 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 SART3Q15020 963 aaKnown RBP15.93■□□□□ 0.14
CXCL12-202ENST00000374426 LEXMQ3ZCV2 418 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 EPC2Q52LR7 807 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 NCOA7Q8NI08 942 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 IGDCC4Q8TDY8 1250 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 TOP1MTQ969P6 601 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 C11orf16Q9NQ32 467 aa15.93■□□□□ 0.14
CXCL12-202ENST00000374426 MUC6Q6W4X9 2439 aa15.92■□□□□ 0.14
CXCL12-202ENST00000374426 TMEM31Q5JXX7 168 aa15.92■□□□□ 0.14
CXCL12-202ENST00000374426 USP17L6PQ6QN14 398 aa15.92■□□□□ 0.14
CXCL12-202ENST00000374426 CATIPQ7Z7H3 387 aa15.92■□□□□ 0.14
CXCL12-202ENST00000374426 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-202ENST00000374426 RUFY2Q8WXA3 655 aa15.92■□□□□ 0.14
CXCL12-202ENST00000374426 MRPL38Q96DV4 380 aaKnown RBP15.92■□□□□ 0.14
CXCL12-202ENST00000374426 FAM122AQ96E09 287 aa15.92■□□□□ 0.14
CXCL12-202ENST00000374426 YME1L1Q96TA2 773 aa15.92■□□□□ 0.14
CXCL12-202ENST00000374426 DOCK5Q9H7D0 1870 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 MEIS2O14770 477 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 UPP2O95045 317 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 GNAT1P11488 350 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 SP4Q02446 784 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 UTP14CQ5TAP6 766 aaKnown RBP15.91■□□□□ 0.14
CXCL12-202ENST00000374426 PCNX4Q63HM2 1172 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 MB21D2Q8IYB1 491 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-202ENST00000374426 LMBR1Q8WVP7 490 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
CXCL12-202ENST00000374426 SAMD11Q96NU1 681 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 SENP7Q9BQF6 1050 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 SPZ1Q9BXG8 430 aa15.91■□□□□ 0.14
CXCL12-202ENST00000374426 ZNF215Q9UL58 517 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-202ENST00000374426 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 PI4K2BG5E9Z4 385 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 H3BNC9 293 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 PIK3CDO00329 1044 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 SGSM2O43147 1006 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 GPR37L1O60883 481 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 ARHGAP4P98171 946 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 PTPROQ16827 1216 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 FAM26DQ5JW98 314 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 XRRA1Q6P2D8 792 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 FAM178BQ8IXR5 827 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 MAP3K14Q99558 947 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 MYL10Q9BUA6 226 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 IFIH1Q9BYX4 1025 aaKnown RBP15.9■□□□□ 0.14
CXCL12-202ENST00000374426 LY9Q9HBG7 655 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms