RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 SNED1Q8TER0 1413 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 OR52Z1P0C646 297 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 SEC24CP53992 1094 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 C6orf89Q6UWU4 347 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 KIAA1328Q86T90 577 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 MICAL1Q8TDZ2 1067 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 SPDL1Q96EA4 605 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 RPGRIP1Q96KN7 1286 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 AFF2P51816 1311 aa19.05■□□□□ 0.64
LDLRAP1-201ENST00000374338 AP1G2O75843 785 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 PPP4CP60510 307 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 DRP2Q13474 957 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 CCDC96Q2M329 555 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 SLC30A10Q6XR72 485 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 RNPC3Q96LT9 517 aaKnown RBP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 CCT8L2Q96SF2 557 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 PSMD14O00487 310 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 HDLBPQ00341 1268 aaKnown RBP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 KCNK18Q7Z418 384 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 KIAA0825Q8IV33 1275 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 PARD3BQ8TEW8 1205 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP40Q9NVE5 1235 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 LTBP4Q8N2S1 1624 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 G3V3G9 751 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 PEX19P40855 299 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 DNA2P51530 1060 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 RBM5P52756 815 aaKnown RBP eCLIP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 DCAF8Q5TAQ9 597 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 ARL6IP4Q66PJ3 421 aaKnown RBP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 CDCA2Q69YH5 1023 aaPredicted RBP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 NEK8Q86SG6 692 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 REXO1Q8N1G1 1221 aaKnown RBP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 NEDD1Q8NHV4 660 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 RBM17Q96I25 401 aaKnown RBP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 CTAGE1Q96RT6 745 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 MMTAG2Q9BU76 263 aaKnown RBP19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 GGA2Q9UJY4 613 aa19.04■□□□□ 0.64
LDLRAP1-201ENST00000374338 GOLGA6L7A0A1B0GV03 622 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 PLEKP08567 350 aaPredicted RBP19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 SLC8A1P32418 973 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 RWDD2BP57060 319 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 KRT26Q7Z3Y9 468 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 MYCBPAPQ8TBZ2 947 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 CCDC51Q96ER9 411 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 ZMYND12Q9H0C1 365 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 HAUS2Q9NVX0 235 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L15C9J2P7 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L13C9JLJ4 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L11C9JVI0 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L18D6R9N7 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L22D6RA61 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L17D6RBQ6 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L19D6RCP7 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L20D6RJB6 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 PPP1R11O60927 126 aaPredicted RBP19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 GNAQP50148 359 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L24Q0WX57 530 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 PAPD7Q5XG87 772 aaKnown RBP19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L6PQ6QN14 398 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 C6orf50Q9HD87 102 aa19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 LIMA1Q9UHB6 759 aaKnown RBP19.03■□□□□ 0.64
LDLRAP1-201ENST00000374338 ESYT3A0FGR9 886 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 USP17L10C9JJH3 530 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 BACH1O14867 736 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 CKAP4Q07065 602 aaKnown RBP19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 ECM1Q16610 540 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 PTGISQ16647 500 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 ACCSLQ4AC99 568 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 WDR59Q6PJI9 974 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 NLRP14Q86W24 1093 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 LMBR1Q8WVP7 490 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 DUSP9Q99956 384 aaKnown RBP19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 TRIM9Q9C026 710 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 ACTR5Q9H9F9 607 aaPredicted RBP19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 ZSCAN5CA6NGD5 496 aaPredicted RBP19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 EDIL3O43854 480 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 SPRED3Q2MJR0 410 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 RUFY1Q96T51 708 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 EXOC1Q9NV70 894 aa19.02■□□□□ 0.64
LDLRAP1-201ENST00000374338 DNM1LO00429 736 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 MTIF2P46199 727 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 SF3A3Q12874 501 aaKnown RBP eCLIP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 NNTQ13423 1086 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 ENOX2Q16206 610 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZC3H12AQ5D1E8 599 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZSCAN29Q8IWY8 852 aaPredicted RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 MB21D1Q8N884 522 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZBTB10Q96DT7 871 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 TUBGCP2Q9BSJ2 902 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 KBTBD4Q9NVX7 518 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 MARCH6O60337 910 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 PPP1R37O75864 691 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 TRIM21P19474 475 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 ATP2B4P23634 1241 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 KCNB1Q14721 858 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 ALS2CLQ60I27 953 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 KDM7AQ6ZMT4 941 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 CCDC121Q6ZUS5 278 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 KIAA0895Q8NCT3 520 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms