RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 PSEN2P49810 448 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 EPHB4P54760 987 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 ARHGAP4P98171 946 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 FPGSQ05932 587 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 FAM177A1Q8N128 213 aaPredicted RBP22.87■■□□□ 1.25
TMEM53-205ENST00000372244 CCDC148Q8NFR7 591 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 BICD2Q8TD16 824 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 CTAGE1Q96RT6 745 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 KIF2CQ99661 725 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 KATNAL1Q9BW62 490 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 HIPK3Q9H422 1215 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 KCNH7Q9NS40 1196 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 TELO2Q9Y4R8 837 aa22.87■■□□□ 1.25
TMEM53-205ENST00000372244 CTDNEP1O95476 244 aa22.86■■□□□ 1.25
TMEM53-205ENST00000372244 ZNF286BP0CG31 522 aa22.86■■□□□ 1.25
TMEM53-205ENST00000372244 CYP2C18P33260 490 aa22.86■■□□□ 1.25
TMEM53-205ENST00000372244 MFSD10Q14728 455 aa22.86■■□□□ 1.25
TMEM53-205ENST00000372244 ME3Q16798 604 aa22.86■■□□□ 1.25
TMEM53-205ENST00000372244 FAM47CQ5HY64 1035 aa22.86■■□□□ 1.25
TMEM53-205ENST00000372244 NOP56O00567 594 aaKnown RBP22.85■■□□□ 1.25
TMEM53-205ENST00000372244 CDKL5O76039 1030 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 SHHQ15465 462 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 KIAA0753Q2KHM9 967 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 NIPA1Q7RTP0 329 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 H3BRB1 525 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 LGALS2P05162 132 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 CYP2C9P11712 490 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 CHMP4BP1P59074 171 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 C9orf50Q5SZB4 431 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 C16orf59Q7L2K0 433 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 TMEM199Q8N511 208 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 AIFM3Q96NN9 605 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 PPP1R12CQ9BZL4 782 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 TUT1Q9H6E5 874 aaKnown RBP22.85■■□□□ 1.25
TMEM53-205ENST00000372244 HDAC6Q9UBN7 1215 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 GTF2IRD1Q9UHL9 959 aa22.85■■□□□ 1.25
TMEM53-205ENST00000372244 UMODL1Q5DID0 1318 aa22.84■■□□□ 1.25
TMEM53-205ENST00000372244 SOX1O00570 391 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-205ENST00000372244 ARP10275 920 aa22.84■■□□□ 1.25
TMEM53-205ENST00000372244 CSF2RAP15509 400 aa22.84■■□□□ 1.25
TMEM53-205ENST00000372244 RBM25P49756 843 aaKnown RBP22.84■■□□□ 1.25
TMEM53-205ENST00000372244 NLRP5P59047 1200 aa22.84■■□□□ 1.25
TMEM53-205ENST00000372244 NPY5RQ15761 445 aa22.84■■□□□ 1.25
TMEM53-205ENST00000372244 GDF6Q6KF10 455 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-205ENST00000372244 C7orf31Q8N865 590 aa22.84■■□□□ 1.25
TMEM53-205ENST00000372244 RASGRP4Q8TDF6 673 aa22.84■■□□□ 1.25
TMEM53-205ENST00000372244 LAMA2P24043 3122 aaKnown RBP22.83■■□□□ 1.25
TMEM53-205ENST00000372244 FAM86B1E9PN63 330 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 M0R2N6 131 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 EDIL3O43854 480 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 LARGE1O95461 756 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 FAM86B2P0C5J1 330 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 PTGISQ16647 500 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 NECAB1Q8N987 351 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 ALG1Q9BT22 464 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 C22orf23Q9BZE7 217 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 PCDHA4Q9UN74 947 aa22.83■■□□□ 1.25
TMEM53-205ENST00000372244 STK36Q9NRP7 1315 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 IGLV3-22A0A075B6J6 115 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 GSTTP1A0A1W2PQM5 241 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 CIITAP33076 1130 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 PPIGQ13427 754 aaKnown RBP eCLIP22.82■■□□□ 1.24
TMEM53-205ENST00000372244 GALNT17Q6IS24 598 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 DAGLBQ8NCG7 672 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 SEPT1Q8WYJ6 367 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 GTF3C6Q969F1 213 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 WNT8AQ9H1J5 351 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 AGO4Q9HCK5 861 aaKnown RBP22.82■■□□□ 1.24
TMEM53-205ENST00000372244 NFASCO94856 1347 aa22.82■■□□□ 1.24
TMEM53-205ENST00000372244 FDPSP14324 419 aaKnown RBP22.81■■□□□ 1.24
TMEM53-205ENST00000372244 HOXC8P31273 242 aa22.81■■□□□ 1.24
TMEM53-205ENST00000372244 ZNF76P36508 570 aa22.81■■□□□ 1.24
TMEM53-205ENST00000372244 HIC1Q14526 733 aa22.81■■□□□ 1.24
TMEM53-205ENST00000372244 VWCEQ96DN2 955 aa22.81■■□□□ 1.24
TMEM53-205ENST00000372244 PITPNM1O00562 1244 aa22.8■■□□□ 1.24
TMEM53-205ENST00000372244 USP11P51784 963 aa22.8■■□□□ 1.24
TMEM53-205ENST00000372244 CCL23P55773 120 aa22.8■■□□□ 1.24
TMEM53-205ENST00000372244 SP4Q02446 784 aa22.8■■□□□ 1.24
TMEM53-205ENST00000372244 ITGB3BPQ13352 177 aaPredicted RBP22.8■■□□□ 1.24
TMEM53-205ENST00000372244 TMEM240Q5SV17 173 aa22.8■■□□□ 1.24
TMEM53-205ENST00000372244 JPH1Q9HDC5 661 aaPredicted RBP22.8■■□□□ 1.24
TMEM53-205ENST00000372244 PKD2L1Q9P0L9 805 aa22.8■■□□□ 1.24
TMEM53-205ENST00000372244 LIMCH1Q9UPQ0 1083 aa22.8■■□□□ 1.24
TMEM53-205ENST00000372244 TCF7P36402 384 aaPredicted RBP22.79■■□□□ 1.24
TMEM53-205ENST00000372244 PLA2G4DQ86XP0 818 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 BLIDQ8IZY5 108 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 LRCH3Q96II8 777 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 PHF20Q9BVI0 1012 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 IL23AQ9NPF7 189 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 SLC9A2Q9UBY0 812 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 NOD1Q9Y239 953 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 DHX15O43143 795 aaKnown RBP22.79■■□□□ 1.24
TMEM53-205ENST00000372244 DTNBO60941 627 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 ZNF200P98182 395 aaPredicted RBP22.79■■□□□ 1.24
TMEM53-205ENST00000372244 GPR153Q6NV75 609 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 TRIM50Q86XT4 487 aa22.79■■□□□ 1.24
TMEM53-205ENST00000372244 NSUN7Q8NE18 718 aaKnown RBP22.79■■□□□ 1.24
TMEM53-205ENST00000372244 DHX38Q92620 1227 aaKnown RBP22.79■■□□□ 1.24
TMEM53-205ENST00000372244 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.79■■□□□ 1.24
TMEM53-205ENST00000372244 RNPEPQ9H4A4 650 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms