RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 DHX8Q14562 1220 aaKnown RBP29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 ZNF658Q5TYW1 1059 aaPredicted RBP29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 IWS1Q96ST2 819 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 EIF2AK1Q9BQI3 630 aaKnown RBP29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 MAFGO15525 162 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 ADCY5O95622 1261 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 ERCC5P28715 1186 aaPredicted RBP29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 KCNK18Q7Z418 384 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 NLRX1Q86UT6 975 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 TBC1D22BQ9NU19 505 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 EML1O00423 815 aa29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 SPATA31C1P0DKV0 1188 aa29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 CNNM4Q6P4Q7 775 aa29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 ANKRD23Q86SG2 305 aa29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 GPRASP2Q96D09 838 aa29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 TXNRD2Q9NNW7 524 aa29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 TUFT1Q9NNX1 390 aa29.42■■■□□ 2.3
ATPAF1-202ENST00000371937 TESPA1A2RU30 521 aaPredicted RBP29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 PDHXO00330 501 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 KLRC4O43908 158 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 RHOBTB3O94955 611 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 ERCC3P19447 782 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 ASIC1P78348 528 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 KMT5BQ4FZB7 885 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 B3GNT9Q6UX72 402 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 DNM3Q9UQ16 869 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 CHMP2AO43633 222 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 MUTP22033 750 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 MKRN3Q13064 507 aaKnown RBP29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 NCAPHQ15003 741 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 HSD17B14Q9BPX1 270 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 UNC45AQ9H3U1 944 aa29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 BMP2KQ9NSY1 1161 aaPredicted RBP29.41■■■□□ 2.3
ATPAF1-202ENST00000371937 POTEFA5A3E0 1075 aa29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 BTBD19C9JJ37 291 aa29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 HUNKP57058 714 aa29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 EPHA7Q15375 998 aa29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 POTEGQ6S5H5 508 aa29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 SMCR8Q8TEV9 937 aaPredicted RBP29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 BRI3BPQ8WY22 251 aa29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 INPP4AQ96PE3 977 aaPredicted RBP29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 MROH8Q9H579 483 aa29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 ADD3Q9UEY8 706 aaKnown RBP29.4■■■□□ 2.3
ATPAF1-202ENST00000371937 PVALEFA0A1B0GWK0 134 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 MYMKA6NI61 221 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 E9PMD0 336 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 DHX15O43143 795 aaKnown RBP29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 AP5Z1O43299 807 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 PLA2G4BP0C869 781 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 SARM1Q6SZW1 724 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 ENOX1Q8TC92 643 aaKnown RBP29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 CDHR1Q96JP9 859 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 EXOC1Q9NV70 894 aa29.39■■■□□ 2.3
ATPAF1-202ENST00000371937 POTEB2H3BUK9 544 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 CYP2C8P10632 490 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 ERVK-9P63128 1117 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 ERVK-24P63145 666 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 NEK9Q8TD19 979 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 TRPM7Q96QT4 1865 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 PPP1R3GB7ZBB8 358 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 CYP4A11Q02928 519 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 ITGB3BPQ13352 177 aaPredicted RBP29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 Q3C1V9 767 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 GNPTABQ3T906 1256 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 SHCBP1Q8NEM2 672 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 PKD2L1Q9P0L9 805 aa29.38■■■□□ 2.29
ATPAF1-202ENST00000371937 STXBP2Q15833 593 aa29.37■■■□□ 2.29
ATPAF1-202ENST00000371937 UNC13DQ70J99 1090 aa29.37■■■□□ 2.29
ATPAF1-202ENST00000371937 DDX12PQ92771 950 aa29.37■■■□□ 2.29
ATPAF1-202ENST00000371937 TRIM5Q9C035 493 aa29.37■■■□□ 2.29
ATPAF1-202ENST00000371937 RGL1Q9NZL6 768 aa29.37■■■□□ 2.29
ATPAF1-202ENST00000371937 SLITRK3O94933 977 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 SSBP05455 408 aaKnown RBP eCLIP29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 GCLCP48506 637 aaPredicted RBP29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 CNTN2Q02246 1040 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 SMYD4Q8IYR2 804 aaPredicted RBP29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 GIMAP8Q8ND71 665 aaPredicted RBP29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 TCEAL9Q9UHQ7 104 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 B4DLN1 442 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 CD44P16070 742 aaKnown RBP29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 CCNA1P78396 465 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 PDE4DQ08499 809 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 MIER3Q7Z3K6 550 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 GPRC5AQ8NFJ5 357 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 DYDC2Q96IM9 177 aa29.36■■■□□ 2.29
ATPAF1-202ENST00000371937 DDX39AO00148 427 aaKnown RBP29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 EIF3JO75822 258 aaKnown RBP29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 ALDH5A1P51649 535 aaPredicted RBP29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 STIM1Q13586 685 aa29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 KCTD2Q14681 263 aa29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 DYMQ7RTS9 669 aa29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 TPH2Q8IWU9 490 aa29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 FAM133AQ8N9E0 248 aa29.35■■■□□ 2.29
ATPAF1-202ENST00000371937 SLC12A3P55017 1021 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 KLHL10Q6JEL2 608 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 SYT2Q8N9I0 419 aaPredicted RBP29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 MPHOSPH6Q99547 160 aaKnown RBP29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 LCTP09848 1927 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 PPP1R2P41236 205 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms