RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 BBXQ8WY36 941 aaPredicted RBP12.33□□□□□ -0.43
BRCC3-204ENST00000369462 APBA2Q99767 749 aa12.33□□□□□ -0.43
BRCC3-204ENST00000369462 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.33□□□□□ -0.43
BRCC3-204ENST00000369462 FLRT1Q9NZU1 646 aa12.33□□□□□ -0.43
BRCC3-204ENST00000369462 VAV3Q9UKW4 847 aa12.33□□□□□ -0.43
BRCC3-204ENST00000369462 KCNH3Q9ULD8 1083 aa12.33□□□□□ -0.43
BRCC3-204ENST00000369462 PLXNA1Q9UIW2 1896 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 DHX15O43143 795 aaKnown RBP12.33□□□□□ -0.44
BRCC3-204ENST00000369462 CHMP2AO43633 222 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-204ENST00000369462 PRKCZQ05513 592 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 ZRSR1Q15695 479 aaKnown RBP12.33□□□□□ -0.44
BRCC3-204ENST00000369462 ZNF296Q8WUU4 475 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-204ENST00000369462 TEKT3Q9BXF9 490 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 BCAS3Q9H6U6 928 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 TBC1D22BQ9NU19 505 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 DACT1Q9NYF0 836 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 FKTNO75072 461 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 KCNA2P16389 499 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 ICAM3P32942 547 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 SP2Q02086 613 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 FAM160A1Q05DH4 1040 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 KLHL40Q2TBA0 621 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 SKOR2Q2VWA4 1001 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-204ENST00000369462 NCAPH2Q6IBW4 605 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 PDGFCQ9NRA1 345 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 ZSWIM8A7E2V4 1837 aa12.33□□□□□ -0.44
BRCC3-204ENST00000369462 HTTP42858 3142 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 SORBS3O60504 671 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 TGFB3P10600 412 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 CYP2C19P33261 490 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 TXLNAP40222 546 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 SYKP43405 635 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
BRCC3-204ENST00000369462 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
BRCC3-204ENST00000369462 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 RASSF8Q8NHQ8 419 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 HPSEQ9Y251 543 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 SYNGAP1Q96PV0 1343 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 ZNF236Q9UL36 1845 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 EML1O00423 815 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 POLR2DO15514 142 aaKnown RBP12.32□□□□□ -0.44
BRCC3-204ENST00000369462 PPP2R5CQ13362 524 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 KARSQ15046 597 aaKnown RBP12.32□□□□□ -0.44
BRCC3-204ENST00000369462 LY6KQ17RY6 165 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 CABP7Q86V35 215 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 FMR1NBQ8N0W7 255 aaPredicted RBP12.32□□□□□ -0.44
BRCC3-204ENST00000369462 SDF4Q9BRK5 362 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 MMTAG2Q9BU76 263 aaKnown RBP12.32□□□□□ -0.44
BRCC3-204ENST00000369462 UNC45AQ9H3U1 944 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 ABHD16BQ9H3Z7 469 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 VTA1Q9NP79 307 aa12.32□□□□□ -0.44
BRCC3-204ENST00000369462 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 MGAMO43451 1857 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 A0A087X0B3 334 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 FAM237AA0A1B0GTK4 181 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 ZNF202O95125 648 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 ARIH2O95376 493 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
BRCC3-204ENST00000369462 SP4Q02446 784 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 SCFD2Q8WU76 684 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 PLIN2Q99541 437 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 SENP7Q9BQF6 1050 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
BRCC3-204ENST00000369462 TXNP10599 105 aaKnown RBP12.31□□□□□ -0.44
BRCC3-204ENST00000369462 UBA1P22314 1058 aaKnown RBP12.31□□□□□ -0.44
BRCC3-204ENST00000369462 ACVR2BQ13705 512 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 PRAMEF19Q5SWL8 479 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 CAVIN1Q6NZI2 390 aaKnown RBP12.31□□□□□ -0.44
BRCC3-204ENST00000369462 B3GNT9Q6UX72 402 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 KATNBL1Q9H079 304 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 SRRDQ9UH36 339 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
BRCC3-204ENST00000369462 SAMM50Q9Y512 469 aa12.31□□□□□ -0.44
BRCC3-204ENST00000369462 HOXD10P28358 340 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 TTLL4Q14679 1199 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 TMEM63BQ5T3F8 832 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 OLFML2BQ68BL8 750 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 KCNV1Q6PIU1 500 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 JPH1Q9HDC5 661 aaPredicted RBP12.3□□□□□ -0.44
BRCC3-204ENST00000369462 TCEAL9Q9UHQ7 104 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 KINO60870 393 aaKnown RBP12.3□□□□□ -0.44
BRCC3-204ENST00000369462 CCNE2O96020 404 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 CYP4A11Q02928 519 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 NEDD9Q14511 834 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 CCDC62Q6P9F0 684 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 MIER3Q7Z3K6 550 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 DHX58Q96C10 678 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 SLC9A2Q9UBY0 812 aa12.3□□□□□ -0.44
BRCC3-204ENST00000369462 NFASCO94856 1347 aa12.29□□□□□ -0.44
BRCC3-204ENST00000369462 GGPS1O95749 300 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms