RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 ABCC12Q96J65 1359 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 PTPRUQ92729 1446 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 CLIC2O15247 247 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 PLA2G4BP0C869 781 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 SWSAP1Q6NVH7 229 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 MCPH1Q8NEM0 835 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 HAUS1Q96CS2 278 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 FAM107BQ9H098 131 aa11.74□□□□□ -0.53
PTPRK-205ENST00000368213 VAV2P52735 878 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 PPP2R3AQ06190 1150 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 NR5A1Q13285 461 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 C6orf163Q5TEZ5 329 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 KRBA2Q6ZNG9 492 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 MAIP1Q8WWC4 291 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 DPF3Q92784 378 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPRK-205ENST00000368213 PFDN4Q9NQP4 134 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 INO80Q9ULG1 1556 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-205ENST00000368213 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
PTPRK-205ENST00000368213 PSMC4P43686 418 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 ARHGAP4P98171 946 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 CLUL1Q15846 466 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 QRICH1Q2TAL8 776 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 AFG3L2Q9Y4W6 797 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 SETBP1Q9Y6X0 1596 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 CEP104O60308 925 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 KRT10P13645 584 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 TSPY1Q01534 308 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 LRRC41Q15345 812 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 EXOC3L4Q17RC7 722 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 TKFCQ3LXA3 575 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 RNF187Q5TA31 235 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-205ENST00000368213 MB21D1Q8N884 522 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 MTRQ99707 1265 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 NEDD4P46934 1319 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 TUBB4AP04350 444 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 ALDH3A1P30838 453 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 SFNP31947 248 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 POLR2FP61218 127 aaKnown RBP11.73□□□□□ -0.53
PTPRK-205ENST00000368213 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 ADGRF4Q8IZF3 695 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 MICALL1Q8N3F8 863 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 OR6B3Q8NGW1 331 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 NSUN4Q96CB9 384 aaKnown RBP11.73□□□□□ -0.53
PTPRK-205ENST00000368213 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-205ENST00000368213 PFDN6O15212 129 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 ALCAMQ13740 583 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 PPP1R18Q6NYC8 613 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 SLC38A10Q9HBR0 1119 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 KCNK9Q9NPC2 374 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 GABBR1Q9UBS5 961 aa11.73□□□□□ -0.53
PTPRK-205ENST00000368213 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 MED7O43513 233 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 SLC25A27O95847 323 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 SRGAP1Q7Z6B7 1085 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 TBC1D10CQ8IV04 446 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 GDAQ9Y2T3 454 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 CTNND1O60716 968 aaKnown RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 MCM6Q14566 821 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 ZNF827Q17R98 1081 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 NSRP1Q9H0G5 558 aaKnown RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 BHMT2Q9H2M3 363 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 FLT1P17948 1338 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 POLR3GO15318 223 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 SARNPP82979 210 aaKnown RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 ZBTB16Q05516 673 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 ZNF568Q3ZCX4 644 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 LONRF3Q496Y0 759 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 MICALCLQ6ZW33 695 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 HEXIM2Q96MH2 286 aaKnown RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 UTP11Q9Y3A2 253 aaKnown RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 RNF180Q86T96 592 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 NSUN7Q8NE18 718 aaKnown RBP11.72□□□□□ -0.53
PTPRK-205ENST00000368213 PIGOQ8TEQ8 1089 aa11.72□□□□□ -0.53
PTPRK-205ENST00000368213 BNIP3LO60238 219 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 UPP2O95045 317 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 CD58P19256 250 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 KCNA4P22459 653 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 MTX1Q13505 466 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
PTPRK-205ENST00000368213 TAOK1Q7L7X3 1001 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 SCN4BQ8IWT1 228 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 TRMT2AQ8IZ69 625 aaKnown RBP11.71□□□□□ -0.53
PTPRK-205ENST00000368213 UBLCP1Q8WVY7 318 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-205ENST00000368213 CEP63Q96MT8 703 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 TRIM7Q9C029 511 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 CLDN3O15551 220 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 LDHAP00338 332 aaKnown RBP11.71□□□□□ -0.53
PTPRK-205ENST00000368213 CUL4BQ13620 913 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 YAF2Q8IY57 180 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms