RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TCF3P15923 654 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 EIF6P56537 245 aaKnown RBP6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 SNW1Q13573 536 aaKnown RBP6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 TMEM67Q5HYA8 995 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 C2CD5Q86YS7 1000 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 CCDC144CPQ8IYA2 1237 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 TTC5Q8N0Z6 440 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 LILRA2Q8N149 483 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 DNAJC5GQ8N7S2 189 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 ANKS4BQ8N8V4 417 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 C19orf47Q8N9M1 422 aaKnown RBP6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 ABHD4Q8TB40 342 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 MYLIPQ8WY64 445 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 TCTN2Q96GX1 697 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 SEC16BQ96JE7 1060 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 PRDM14Q9GZV8 571 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 GOLGA2P5Q9HBQ8 144 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 CHST7Q9NS84 486 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 INPP5FQ9Y2H2 1132 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 ANKRD31Q8N7Z5 1873 aa6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 COL3A1P02461 1466 aaPredicted RBP6.91□□□□□ -1.3
RNU4-4P-201ENST00000364588 TIAM2Q8IVF5 1701 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 CACNA1SQ13698 1873 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 FAM86C2PA6NEL3 165 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 STARD3NLO95772 234 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 PRELPP51888 382 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 TEFQ10587 303 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 AUHQ13825 339 aaKnown RBP6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 TBC1D9BQ66K14 1250 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 MPZL3Q6UWV2 235 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 TTLL6Q8N841 843 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 IL17REQ8NFR9 667 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 ZNF496Q96IT1 587 aaPredicted RBP6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 ADAMTS10Q9H324 1103 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 FBXL21Q9UKT6 434 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 TCFL5Q9UL49 500 aa6.9□□□□□ -1.3
RNU4-4P-201ENST00000364588 SCN7AQ01118 1682 aa6.9□□□□□ -1.31
RNU4-4P-201ENST00000364588 COL11A2P13942 1736 aaPredicted RBP6.9□□□□□ -1.31
RNU4-4P-201ENST00000364588 LRRC10BA6NIK2 292 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 H0YIN7 160 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 FARP2O94887 1054 aaPredicted RBP6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 NASPP49321 788 aaPredicted RBP6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 EIF5P55010 431 aaKnown RBP6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 FSTL1Q12841 308 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 NR0B2Q15466 257 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 FYB2Q5VWT5 728 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZNF790Q6PG37 636 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 SPPL2CQ8IUH8 684 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 C7orf61Q8IZ16 206 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZNF622Q969S3 477 aaKnown RBP eCLIP6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 FOXP3Q9BZS1 431 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 GFOD1Q9NXC2 390 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 HEG1Q9ULI3 1381 aa6.89□□□□□ -1.31
RNU4-4P-201ENST00000364588 A0A087WZG4 1122 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZNF503-AS2A6NEH8 195 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 KCNQ3O43525 872 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 A1BGP04217 495 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 SYPP08247 313 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 ERCC5P28715 1186 aaPredicted RBP6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 PIP4K2AP48426 406 aaPredicted RBP6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 GIPRP48546 466 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 GNL2Q13823 731 aaKnown RBP6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 TDRD10Q5VZ19 366 aaKnown RBP6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 CPLX3Q8WVH0 158 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 PHACTR3Q96KR7 559 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 DSCC1Q9BVC3 393 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 ACBD3Q9H3P7 528 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 PHAXQ9H814 394 aaKnown RBP6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 CAPN10Q9HC96 672 aa6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 DICER1Q9UPY3 1922 aaKnown RBP6.88□□□□□ -1.31
RNU4-4P-201ENST00000364588 FER1L6Q2WGJ9 1857 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 SLX4Q8IY92 1834 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 BCORQ6W2J9 1755 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 NPC1L1Q9UHC9 1359 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 GLTPD2A6NH11 291 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 BTBD11A6QL63 1104 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 C9IYK1 514 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 NPHP1O15259 732 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 VEGFAP15692 232 aaPredicted RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 RPL10P27635 214 aaKnown RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 PRKAR2BP31323 418 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 BMP8BP34820 402 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 IL6STP40189 918 aaPredicted RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 PRR5LQ6MZQ0 368 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 PPFIBP1Q86W92 1011 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 SMC1BQ8NDV3 1235 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 FCRL2Q96LA5 508 aaPredicted RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 TEX13AQ9BXU3 409 aaPredicted RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 CWC22Q9HCG8 908 aaKnown RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZNF214Q9UL59 606 aaPredicted RBP6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZNF281Q9Y2X9 895 aa6.87□□□□□ -1.31
RNU4-4P-201ENST00000364588 CEMIPQ8WUJ3 1361 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 PRAMEF22A3QJZ6 481 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms