RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PARVGQ9HBI0 331 aa17.83■□□□□ 0.45
SCAF1-201ENST00000360565 C1orf112Q9NSG2 853 aa17.83■□□□□ 0.45
SCAF1-201ENST00000360565 MORC2Q9Y6X9 1032 aaPredicted RBP17.83■□□□□ 0.45
SCAF1-201ENST00000360565 LIG4P49917 911 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 MAP3K9P80192 1104 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 CTTNQ14247 550 aaKnown RBP17.83■□□□□ 0.44
SCAF1-201ENST00000360565 NR1I3Q14994 352 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 MLXIPQ9HAP2 919 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 POTEB3A0JP26 581 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 POTECB2RU33 542 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 GH2P01242 217 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 ALDH3A1P30838 453 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 TNFAIP1Q13829 316 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 POTEBQ6S5H4 581 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 MCF2L2Q86YR7 1114 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 ANKRD42Q8N9B4 389 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 PIGOQ8TEQ8 1089 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 POMGNT1Q8WZA1 660 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 TRIM9Q9C026 710 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 AZI2Q9H6S1 392 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 PLCB1Q9NQ66 1216 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 PCDHA6Q9UN73 950 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 PCDHA8Q9Y5H6 950 aa17.83■□□□□ 0.44
SCAF1-201ENST00000360565 KDM6AO15550 1401 aaPredicted RBP17.83■□□□□ 0.44
SCAF1-201ENST00000360565 KRT19P08727 400 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 PDE6CP51160 858 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 ITPK1Q13572 414 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 NFIXQ14938 502 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 CCSER1Q9C0I3 900 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 KRT15P19012 456 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 APBA1Q02410 837 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 FOXP4Q8IVH2 680 aaPredicted RBP17.82■□□□□ 0.44
SCAF1-201ENST00000360565 RAD17O75943 681 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 RAD54LQ92698 747 aa17.82■□□□□ 0.44
SCAF1-201ENST00000360565 TROAPQ12815 778 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 DMP1Q13316 513 aaPredicted RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 GNPTABQ3T906 1256 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 ANKRD40Q6AI12 368 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 RAD9BQ6WBX8 426 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 NYAP1Q6ZVC0 841 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 GUF1Q8N442 669 aaKnown RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 ANKRD7Q92527 254 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 GLG1Q92896 1179 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 LIMA1Q9UHB6 759 aaKnown RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 BAZ2BQ9UIF8 2168 aaKnown RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 HNRNPDLO14979 420 aaKnown RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 MMP10P09238 476 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 HNRNPH2P55795 449 aaKnown RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 MAIP1Q8WWC4 291 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 AKR1B1P15121 316 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 COASYQ13057 564 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 KCNB1Q14721 858 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 DAAM1Q9Y4D1 1078 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 CAPN7Q9Y6W3 813 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 A0A1W2PQC6 194 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 CTIFO43310 598 aaKnown RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 IRX5P78411 483 aaPredicted RBP17.81■□□□□ 0.44
SCAF1-201ENST00000360565 GPSM2P81274 684 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 FAM83BQ5T0W9 1011 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 ADSSL1Q8N142 457 aa17.81■□□□□ 0.44
SCAF1-201ENST00000360565 ANO9A1A5B4 782 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 TBC1D8O95759 1140 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 ADCY8P40145 1251 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 SBK1Q52WX2 424 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 TMEM179Q6ZVK1 233 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 SFR1Q86XK3 245 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 TSNARE1Q96NA8 513 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 STIM2Q9P246 746 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 TXNDC16Q9P2K2 825 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 GFPT1Q06210 699 aaPredicted RBP17.8■□□□□ 0.44
SCAF1-201ENST00000360565 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 CACNA2D3Q8IZS8 1091 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 AP1M1Q9BXS5 423 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 NFU1Q9UMS0 254 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 ARHGAP4P98171 946 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 MIGA2Q7L4E1 593 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 VSIG1Q86XK7 387 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 PROM2Q8N271 834 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 NT5C1BQ96P26 610 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 ATP8A1Q9Y2Q0 1164 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 RRP15Q9Y3B9 282 aaKnown RBP17.8■□□□□ 0.44
SCAF1-201ENST00000360565 OVOS2A0A0G2JMS6 1433 aa17.8■□□□□ 0.44
SCAF1-201ENST00000360565 LRRIQ4A6NIV6 560 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 PALMO75781 387 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 NPR1P16066 1061 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 CRKP46108 304 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 PLTPP55058 493 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 KCNH2Q12809 1159 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 GSPT2Q8IYD1 628 aaKnown RBP17.79■□□□□ 0.44
SCAF1-201ENST00000360565 KCNG1Q9UIX4 513 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 LACTBP83111 547 aaPredicted RBP17.79■□□□□ 0.44
SCAF1-201ENST00000360565 QRICH1Q2TAL8 776 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 SPZ1Q9BXG8 430 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 POTEFA5A3E0 1075 aa17.79■□□□□ 0.44
SCAF1-201ENST00000360565 POTEIP0CG38 1075 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms