RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 POTEFA5A3E0 1075 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 POTEIP0CG38 1075 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 SPATA31C1P0DKV0 1188 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 GNG11P61952 73 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 NCBP1Q09161 790 aaKnown RBP20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 POTEGQ6S5H5 508 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 POTEEQ6S8J3 1075 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 UIMC1Q96RL1 719 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 ZNF341Q9BYN7 854 aa20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 ZNF215Q9UL58 517 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-203ENST00000359895 RNF225M0QZC1 329 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 ERVK-24P63145 666 aa20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 FKBP3Q00688 224 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 VWA3BQ502W6 1294 aa20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 CEP63Q96MT8 703 aa20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 TEPSINQ96N21 525 aa20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 KIAA1683Q9H0B3 1180 aa20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 MRPL44Q9H9J2 332 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 TUFT1Q9NNX1 390 aa20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 PCDHA2Q9Y5H9 948 aa20.3■□□□□ 0.84
PDLIM7-203ENST00000359895 DCAF8L1A6NGE4 600 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 CTNND1O60716 968 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 GNA14O95837 355 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 ICAM1P05362 532 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 TRIM21P19474 475 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 MUTP22033 750 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 ZBED6P86452 979 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 LRRC41Q15345 812 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 ZCWPW2Q504Y3 356 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 HERC4Q5GLZ8 1057 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 PPP4R3CPQ6ZMV5 832 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 LRRC55Q6ZSA7 311 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 PRPF38AQ8NAV1 312 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 ZNF397Q8NF99 534 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 SLC5A5Q92911 643 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 GLIS2Q9BZE0 524 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 TTYH3Q9C0H2 523 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 ZNHIT6Q9NWK9 470 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 SHTN1A0MZ66 631 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 KIF5CO60282 957 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 EYA4O95677 639 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 PPP2R5CQ13362 524 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 ARSHQ5FYA8 562 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 CCDC84Q86UT8 332 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 SAMD3Q8N6K7 520 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 TBC1D5Q92609 795 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 PCMTD1Q96MG8 357 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 EIF2AK1Q9BQI3 630 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 SLF1Q9BQI6 1058 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 NDST4Q9H3R1 872 aa20.29■□□□□ 0.84
PDLIM7-203ENST00000359895 UTRNP46939 3433 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 URI1O94763 535 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 MEA1Q16626 185 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 CEP55Q53EZ4 464 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 LRCH2Q5VUJ6 765 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 KRT26Q7Z3Y9 468 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 CYP2W1Q8TAV3 490 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 WDR18Q9BV38 432 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 WDR11Q9BZH6 1224 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 FBXO28Q9NVF7 368 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 CCPG1Q9ULG6 757 aa20.28■□□□□ 0.84
PDLIM7-203ENST00000359895 PSMD10O75832 226 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 GMPSP49915 693 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 HSD17B4P51659 736 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 GIT2Q14161 759 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 ARHGAP29Q52LW3 1261 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 OTOP1Q7RTM1 612 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 MCF2L2Q86YR7 1114 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 MICALL2Q8IY33 904 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 HOOK2Q96ED9 719 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 EEF2KMTQ96G04 330 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 EMILIN3Q9NT22 766 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 MAP3K20Q9NYL2 800 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 CGNQ9P2M7 1197 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 MYO1AQ9UBC5 1043 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 BCS1LQ9Y276 419 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 COL4A3BPQ9Y5P4 624 aa20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 EPN1Q9Y6I3 576 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-203ENST00000359895 PARP14Q460N5 1801 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 NPHP3-ACAD11A0A0J9YXS1 232 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 TRAF5O00463 557 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 INPP5BP32019 993 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 PRELPP51888 382 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 PSMC6P62333 389 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 CDK17Q00537 523 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 GHRHRQ02643 423 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■■■□□ 14.6
PDLIM7-203ENST00000359895 EDRF1Q3B7T1 1238 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 DCAF15Q66K64 600 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 PDCL2Q8N4E4 241 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 GLIS3Q8NEA6 775 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 WDR24Q96S15 920 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 LZTFL1Q9NQ48 299 aa20.26■□□□□ 0.83
PDLIM7-203ENST00000359895 FZD9O00144 591 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 MEIS1O00470 390 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 NDUFA10O95299 355 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 USP14P54578 494 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms