RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 MARCH6O60337 910 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 PRR29P0C7W0 189 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 CCND2P30279 289 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
CXCL12-201ENST00000343575 IWS1Q96ST2 819 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 MMP19Q99542 508 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 ZNF577Q9BSK1 485 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 GTPBP4Q9BZE4 634 aaKnown RBP16.5■□□□□ 0.23
CXCL12-201ENST00000343575 AGO4Q9HCK5 861 aaKnown RBP16.5■□□□□ 0.23
CXCL12-201ENST00000343575 KIAA1217Q5T5P2 1943 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 A0A087WWV3 80 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 FCER1AP12319 257 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 PLCG1P19174 1290 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 CCNA1P78396 465 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 DMTNQ08495 405 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 PNOCQ13519 176 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 MTMR1Q13613 665 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 C17orf99Q6UX52 265 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 IQUBQ8NA54 791 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 KIAA1468Q9P260 1216 aa16.5■□□□□ 0.23
CXCL12-201ENST00000343575 LRRC37A2A6NM11 1700 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 GOLGA6L6A8MZA4 724 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 TLR2O60603 784 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 COBLO75128 1261 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 SPATA31C1P0DKV0 1188 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 GRM1Q13255 1194 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 PPP2R5CQ13362 524 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 KCTD2Q14681 263 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 HYIQ5T013 277 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 LRCH2Q5VUJ6 765 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 KCNK18Q7Z418 384 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 PAGE5Q96GU1 130 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 RIT2Q99578 217 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 RAB34Q9BZG1 259 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 BLOC1S4Q9NUP1 217 aa16.49■□□□□ 0.23
CXCL12-201ENST00000343575 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 AOC2O75106 756 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 MED24O75448 989 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 CASP1P29466 404 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 TXLNAP40222 546 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 APLP1P51693 650 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 SREBF2Q12772 1141 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 ZRSR1Q15695 479 aaKnown RBP16.48■□□□□ 0.23
CXCL12-201ENST00000343575 TMEM119Q4V9L6 283 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 GPR142Q7Z601 462 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 SNX29Q8TEQ0 813 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 STAMQ92783 540 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 GPRASP2Q96D09 838 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 UNC45AQ9H3U1 944 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 TUBE1Q9UJT0 475 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 PLXNB2O15031 1838 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 CRHR2Q13324 411 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 POSTNQ15063 836 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 DEFB115Q30KQ5 88 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 ZNF792Q3KQV3 632 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 RRAGBQ5VZM2 374 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 KRT79Q5XKE5 535 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 PAXIP1Q6ZW49 1069 aaPredicted RBP16.48■□□□□ 0.23
CXCL12-201ENST00000343575 CATSPER3Q86XQ3 398 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 SPATA20Q8TB22 786 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 PCDHA5Q9Y5H7 936 aa16.48■□□□□ 0.23
CXCL12-201ENST00000343575 GAS7O60861 476 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 ADCY5O95622 1261 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 ADORA2AP29274 412 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 STAT6P42226 847 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 AFMP43652 599 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 SARSP49591 514 aaKnown RBP16.47■□□□□ 0.23
CXCL12-201ENST00000343575 STXBP2Q15833 593 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 HSD17B14Q9BPX1 270 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 KBTBD4Q9NVX7 518 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 ADD3Q9UEY8 706 aaKnown RBP16.47■□□□□ 0.23
CXCL12-201ENST00000343575 MCM3APO60318 1980 aa16.47■□□□□ 0.23
CXCL12-201ENST00000343575 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 MAFGO15525 162 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 STRNO43815 780 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.23
CXCL12-201ENST00000343575 STAM2O75886 525 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 KCNA2P16389 499 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 SP2Q02086 613 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 TYRO3Q06418 890 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 NOGQ13253 232 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 NT5DC1Q5TFE4 455 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 PYM1Q9BRP8 204 aaKnown RBP16.46■□□□□ 0.23
CXCL12-201ENST00000343575 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
CXCL12-201ENST00000343575 POTEB3A0JP26 581 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 DDX39AO00148 427 aaKnown RBP16.46■□□□□ 0.22
CXCL12-201ENST00000343575 RPA1P27694 616 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 ICAM3P32942 547 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 CCT6AP40227 531 aaKnown RBP16.46■□□□□ 0.22
CXCL12-201ENST00000343575 DPYDQ12882 1025 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 GRB14Q14449 540 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms