RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TESK2Q96S53 571 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 USP40Q9NVE5 1235 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 GSNP06396 782 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 GUCY2CP25092 1073 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 PPP1R36Q96LQ0 422 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 SEC24DO94855 1032 aaPredicted RBP17.67■□□□□ 0.42
PTCH1-201ENST00000331920 TRPC1P48995 793 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 ADA2Q9NZK5 511 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 F8W8V4 182 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 UBXN2AP68543 259 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 CASS4Q9NQ75 786 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 AK9Q5TCS8 1911 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 ELF1P32519 619 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 SLC7A5Q01650 507 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 FAM160B1Q5W0V3 765 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 SRPK1Q96SB4 655 aaKnown RBP17.67■□□□□ 0.42
PTCH1-201ENST00000331920 STK32BQ9NY57 414 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 RRP15Q9Y3B9 282 aaKnown RBP17.67■□□□□ 0.42
PTCH1-201ENST00000331920 PPARGP37231 505 aaPredicted RBP17.67■□□□□ 0.42
PTCH1-201ENST00000331920 MFAP3P55082 362 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.42
PTCH1-201ENST00000331920 PCIF1Q9H4Z3 704 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 ZNF532Q9HCE3 1301 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 CD58P19256 250 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 STAT2P52630 851 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 IQANK1A0A1B0GTG1 560 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 GINM1Q9NU53 330 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 PAMP19021 973 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 TAC1P20366 129 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 RNF135Q8IUD6 432 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 DNAJC7Q99615 494 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 ARHGAP26Q9UNA1 814 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 DEUP1Q05D60 604 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 TTC17Q96AE7 1141 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 LRRC37BQ96QE4 947 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 FSD1LQ9BXM9 530 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 AARSP49588 968 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTCH1-201ENST00000331920 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 KRT40Q6A162 431 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 SH3KBP1Q96B97 665 aa17.66■□□□□ 0.42
PTCH1-201ENST00000331920 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
PTCH1-201ENST00000331920 M0R2C6 588 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 TSC22D1Q15714 1073 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 ZNF212Q9UDV6 495 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 CCNL1Q9UK58 526 aaPredicted RBP17.65■□□□□ 0.42
PTCH1-201ENST00000331920 CAB39Q9Y376 341 aaPredicted RBP17.65■□□□□ 0.42
PTCH1-201ENST00000331920 ACSL3O95573 720 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 SERPINB2P05120 415 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 GOLGA8HP0CJ92 632 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 SIX6OS1Q8N1H7 587 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 KCNV2Q8TDN2 545 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 IBTKQ9P2D0 1353 aaPredicted RBP17.65■□□□□ 0.42
PTCH1-201ENST00000331920 PRPSAP2O60256 369 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 ZNF233A6NK53 670 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 E5RI56 91 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 MAPK13O15264 365 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 SRRM1Q8IYB3 904 aaKnown RBP17.65■□□□□ 0.42
PTCH1-201ENST00000331920 IFT43Q96FT9 208 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 PLEKHM2Q8IWE5 1019 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 CHURC1Q8WUH1 139 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 ASPSCR1Q9BZE9 553 aa17.65■□□□□ 0.42
PTCH1-201ENST00000331920 RPN1P04843 607 aaKnown RBP17.65■□□□□ 0.42
PTCH1-201ENST00000331920 GYG2O15488 501 aa17.64■□□□□ 0.42
PTCH1-201ENST00000331920 SCNN1DP51172 638 aa17.64■□□□□ 0.42
PTCH1-201ENST00000331920 HEXIM2Q96MH2 286 aaKnown RBP17.64■□□□□ 0.42
PTCH1-201ENST00000331920 TRIM45Q9H8W5 580 aaPredicted RBP17.64■□□□□ 0.42
PTCH1-201ENST00000331920 C6orf203Q9P0P8 240 aaPredicted RBP17.64■□□□□ 0.42
PTCH1-201ENST00000331920 CCDC92Q53HC0 331 aaPredicted RBP17.64■□□□□ 0.41
PTCH1-201ENST00000331920 TNNI3KQ59H18 835 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 SELENONQ9NZV5 590 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 SENP1Q9P0U3 644 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 FPGT-TNNI3KV9GXZ4 949 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 HECW1Q76N89 1606 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 RNF103-CHMP3A0A140T963 221 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 POTEB3A0JP26 581 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 ECEL1O95672 775 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 GOLGA8FQ08AF8 430 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 PTPN21Q16825 1174 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 POTEBQ6S5H4 581 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 TRIML1Q8N9V2 468 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 DAB1O75553 588 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 SERPIND1P05546 499 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 PYGBP11216 843 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 PLA2G4DQ86XP0 818 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 PYROXD1Q8WU10 500 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 MKRN3Q13064 507 aaKnown RBP17.64■□□□□ 0.41
PTCH1-201ENST00000331920 ODR4Q5SWX8 454 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 SPATA5Q8NB90 893 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 RFWD2Q8NHY2 731 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 RAD18Q9NS91 495 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 USE1Q9NZ43 259 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 TPCN1Q9ULQ1 816 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 ABCC5O15440 1437 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 AQRO60306 1485 aaKnown RBP eCLIP17.64■□□□□ 0.413e-7■■■□□ 17
PTCH1-201ENST00000331920 MARK3P27448 753 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 TSPY1Q01534 308 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 HDDC2Q7Z4H3 204 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 DHX38Q92620 1227 aaKnown RBP17.64■□□□□ 0.41
PTCH1-201ENST00000331920 ULK4Q96C45 1275 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms