RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MCTP2Q6DN12 878 aa31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 GDF6Q6KF10 455 aaPredicted RBP31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 PSRC1Q6PGN9 363 aaPredicted RBP31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 CPLX2Q6PUV4 134 aaKnown RBP31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 CCDC148Q8NFR7 591 aa31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 GPR20Q99678 358 aa31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 C16orf70Q9BSU1 422 aa31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 TMEM260Q9NX78 707 aa31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 HDAC6Q9UBN7 1215 aa31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 LGALS2P05162 132 aa31.56■■■□□ 2.64
ATPAF1-201ENST00000329231 SREBF1P36956 1147 aa31.56■■■□□ 2.64
ATPAF1-201ENST00000329231 SSRP1Q08945 709 aaKnown RBP31.56■■■□□ 2.64
ATPAF1-201ENST00000329231 BFSP2Q13515 415 aa31.56■■■□□ 2.64
ATPAF1-201ENST00000329231 TMEM240Q5SV17 173 aa31.56■■■□□ 2.64
ATPAF1-201ENST00000329231 C16orf59Q7L2K0 433 aa31.56■■■□□ 2.64
ATPAF1-201ENST00000329231 MXRA8Q9BRK3 442 aa31.56■■■□□ 2.64
ATPAF1-201ENST00000329231 H3BRB1 525 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 PITPNM1O00562 1244 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 ATP9AO75110 1047 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 ACRP10323 421 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 KCNA2P16389 499 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 STK3Q13188 491 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 JAKMIP3Q5VZ66 844 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 RPUSD2Q8IZ73 545 aaKnown RBP31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 RETREG2Q8NC44 543 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 IL17RAQ96F46 866 aa31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 TUT1Q9H6E5 874 aaKnown RBP31.55■■■□□ 2.64
ATPAF1-201ENST00000329231 SP4Q02446 784 aa31.54■■■□□ 2.64
ATPAF1-201ENST00000329231 ANKRD1Q15327 319 aa31.54■■■□□ 2.64
ATPAF1-201ENST00000329231 ZNF365Q70YC5 407 aa31.54■■■□□ 2.64
ATPAF1-201ENST00000329231 REXO1Q8N1G1 1221 aaKnown RBP31.54■■■□□ 2.64
ATPAF1-201ENST00000329231 CCDC155Q8N6L0 562 aa31.54■■■□□ 2.64
ATPAF1-201ENST00000329231 BICD2Q8TD16 824 aa31.54■■■□□ 2.64
ATPAF1-201ENST00000329231 SH3GLB2Q9NR46 395 aa31.54■■■□□ 2.64
ATPAF1-201ENST00000329231 CEP55Q53EZ4 464 aa31.53■■■□□ 2.64
ATPAF1-201ENST00000329231 CAGE1Q8TC20 777 aa31.53■■■□□ 2.64
ATPAF1-201ENST00000329231 SCLYQ96I15 445 aa31.53■■■□□ 2.64
ATPAF1-201ENST00000329231 KCNH7Q9NS40 1196 aa31.53■■■□□ 2.64
ATPAF1-201ENST00000329231 ZNF76P36508 570 aa31.52■■■□□ 2.64
ATPAF1-201ENST00000329231 SMAD3P84022 425 aaKnown RBP31.52■■■□□ 2.64
ATPAF1-201ENST00000329231 ARHGAP4P98171 946 aa31.52■■■□□ 2.64
ATPAF1-201ENST00000329231 CTAGE1Q96RT6 745 aa31.52■■■□□ 2.64
ATPAF1-201ENST00000329231 SLKQ9H2G2 1235 aaPredicted RBP31.52■■■□□ 2.64
ATPAF1-201ENST00000329231 PKD2L1Q9P0L9 805 aa31.52■■■□□ 2.64
ATPAF1-201ENST00000329231 ZNF215Q9UL58 517 aaPredicted RBP31.52■■■□□ 2.64
ATPAF1-201ENST00000329231 DEXIO95424 95 aa31.51■■■□□ 2.63
ATPAF1-201ENST00000329231 FGBP02675 491 aa31.51■■■□□ 2.63
ATPAF1-201ENST00000329231 CYP2W1Q8TAV3 490 aa31.51■■■□□ 2.63
ATPAF1-201ENST00000329231 MTIF3Q9H2K0 278 aaKnown RBP31.51■■■□□ 2.63
ATPAF1-201ENST00000329231 VPS54Q9P1Q0 977 aa31.51■■■□□ 2.63
ATPAF1-201ENST00000329231 SZT2Q5T011 3432 aa31.51■■■□□ 2.63
ATPAF1-201ENST00000329231 CDKL5O76039 1030 aa31.5■■■□□ 2.63
ATPAF1-201ENST00000329231 SEC24BO95487 1268 aa31.5■■■□□ 2.63
ATPAF1-201ENST00000329231 PFKMP08237 780 aa31.5■■■□□ 2.63
ATPAF1-201ENST00000329231 RFC2P35250 354 aa31.5■■■□□ 2.63
ATPAF1-201ENST00000329231 UTP14CQ5TAP6 766 aaKnown RBP31.5■■■□□ 2.63
ATPAF1-201ENST00000329231 SEPT1Q8WYJ6 367 aa31.5■■■□□ 2.63
ATPAF1-201ENST00000329231 TPCN1Q9ULQ1 816 aa31.5■■■□□ 2.63
ATPAF1-201ENST00000329231 MEIS1O00470 390 aa31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 IQCF3P0C7M6 154 aa31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 FAM109BQ6ICB4 259 aaPredicted RBP31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 NIPA1Q7RTP0 329 aa31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 DEFB123Q8N688 67 aa31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 AFAP1L1Q8TED9 768 aa31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 HERVK_113Q902F9 699 aa31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 TELO2Q9Y4R8 837 aa31.49■■■□□ 2.63
ATPAF1-201ENST00000329231 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 CYP3A4P08684 503 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 TCF7P36402 384 aaPredicted RBP31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 AK2P54819 239 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 NLRP5P59047 1200 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 SCRN1Q12765 414 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 PTK7Q13308 1070 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 RASIP1Q5U651 963 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 SDF4Q9BRK5 362 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 JPH1Q9HDC5 661 aaPredicted RBP31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 NFASCO94856 1347 aa31.48■■■□□ 2.63
ATPAF1-201ENST00000329231 DOCK5Q9H7D0 1870 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 C17orf102A2RUQ5 167 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 ADAMTS3O15072 1205 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 PFKFB2O60825 505 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 SMIM10L2AP0DMW4 78 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 SMIM10L2BP0DMW5 78 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 ARP10275 920 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 RBL2Q08999 1139 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 TRIM50Q86XT4 487 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 CRYGNQ8WXF5 182 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 AGO4Q9HCK5 861 aaKnown RBP31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 SLC9A2Q9UBY0 812 aa31.47■■■□□ 2.63
ATPAF1-201ENST00000329231 ZNF200P98182 395 aaPredicted RBP31.46■■■□□ 2.63
ATPAF1-201ENST00000329231 DEFB128Q7Z7B8 93 aa31.46■■■□□ 2.63
ATPAF1-201ENST00000329231 FAM177A1Q8N128 213 aaPredicted RBP31.46■■■□□ 2.63
ATPAF1-201ENST00000329231 DHX38Q92620 1227 aaKnown RBP31.46■■■□□ 2.63
ATPAF1-201ENST00000329231 GSTTP1A0A1W2PQM5 241 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 GNAT1P11488 350 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 SELPP16109 830 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 HOXC8P31273 242 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 Q7L0L9 218 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms