RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CES2O00748 559 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 HDLBPQ00341 1268 aaKnown RBP18.41■□□□□ 0.54
SSH1-201ENST00000326470 FKBP3Q00688 224 aaKnown RBP18.41■□□□□ 0.54
SSH1-201ENST00000326470 LRRC41Q15345 812 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 ZCWPW2Q504Y3 356 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 MAATS1Q7Z4T9 603 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 ARFGAP2Q8N6H7 521 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 DDX12PQ92771 950 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 LRRC27Q9C0I9 530 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 ISCUQ9H1K1 167 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 POLR2FP61218 127 aaKnown RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 CALCRLQ16602 461 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 MYOCDQ8IZQ8 938 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 GLIS3Q8NEA6 775 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 LSM14BQ9BX40 385 aaKnown RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 VCPKMTQ9H867 229 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 PACSIN2Q9UNF0 486 aaPredicted RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 TAF1P21675 1872 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 GOLGA6L10A6NI86 522 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 ACTN3Q08043 901 aaPredicted RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 PLCB4Q15147 1175 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 C6orf89Q6UWU4 347 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 DZIP1Q86YF9 867 aaKnown RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 REXO1Q8N1G1 1221 aaKnown RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
SSH1-201ENST00000326470 BIN2Q9UBW5 565 aaPredicted RBP18.4■□□□□ 0.54
SSH1-201ENST00000326470 A0A087X0T9 212 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 FAM228BP0C875 321 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 RNASE9P60153 205 aaKnown RBP18.39■□□□□ 0.53
SSH1-201ENST00000326470 TMEM266Q2M3C6 531 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 CCDC40Q4G0X9 1142 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 RNF187Q5TA31 235 aaPredicted RBP18.39■□□□□ 0.53
SSH1-201ENST00000326470 MAST2Q6P0Q8 1798 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 E7EVH7 732 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 TRAF5O00463 557 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 SMTNP53814 917 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 DRP2Q13474 957 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 ITPK1Q13572 414 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 CUL1Q13616 776 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 PDIA5Q14554 519 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 SPTY2D1Q68D10 685 aaPredicted RBP18.39■□□□□ 0.53
SSH1-201ENST00000326470 SLC44A5Q8NCS7 719 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 RAB34Q9BZG1 259 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 AIPL1Q9NZN9 384 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 SEC63Q9UGP8 760 aaKnown RBP18.39■□□□□ 0.53
SSH1-201ENST00000326470 SPATA31A5Q5VU36 1347 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 SPATA31A7Q8IWB4 1347 aa18.39■□□□□ 0.53
SSH1-201ENST00000326470 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 ESYT2A0FGR8 921 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 BTNL10A8MVZ5 291 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 H0YGN5 161 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 GCOM1H8Y6P7 765 aaPredicted RBP18.38■□□□□ 0.53
SSH1-201ENST00000326470 MYZAPP0CAP1 466 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 ECHS1P30084 290 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 SIK1P57059 783 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 IFT88Q13099 833 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 BARGINQ6ZT62 677 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 KLHL7Q8IXQ5 586 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 GPATCH11Q8N954 259 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 C3orf20Q8ND61 904 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 TAF4BQ92750 862 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.38■□□□□ 0.53
SSH1-201ENST00000326470 PACSIN1Q9BY11 444 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 NFS1Q9Y697 457 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 RASA1P20936 1047 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 SMARCA1P28370 1054 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 MAP2K2P36507 400 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 HSD17B3P37058 310 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 HLTFQ14527 1009 aaKnown RBP eCLIP18.38■□□□□ 0.53
SSH1-201ENST00000326470 TMEM119Q4V9L6 283 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 CLEC4GQ6UXB4 293 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 SH3RF3Q8TEJ3 882 aaPredicted RBP18.38■□□□□ 0.53
SSH1-201ENST00000326470 SNX29Q8TEQ0 813 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 CEP63Q96MT8 703 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 NUDT12Q9BQG2 462 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 ADAMTS1Q9UHI8 967 aa18.38■□□□□ 0.53
SSH1-201ENST00000326470 POTEMA6NI47 508 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 GNA14O95837 355 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 HPDP32754 393 aaPredicted RBP18.37■□□□□ 0.53
SSH1-201ENST00000326470 KLHL30Q0D2K2 578 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 RAPGEF1Q13905 1077 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 RPS6KA1Q15418 735 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 KRT79Q5XKE5 535 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 KCNK18Q7Z418 384 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 SCFD2Q8WU76 684 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 LRRC45Q96CN5 670 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 CYFIP2Q96F07 1278 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 TMEM260Q9NX78 707 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 JAG2Q9Y219 1238 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 SLC37A4O43826 429 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 MARSP56192 900 aaKnown RBP18.37■□□□□ 0.53
SSH1-201ENST00000326470 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
SSH1-201ENST00000326470 COASYQ13057 564 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 SEPT2Q15019 361 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 TRIM59Q8IWR1 403 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms