RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 GCOM1H8Y6P7 765 aaPredicted RBP8.42□□□□□ -1.06
IFT88-201ENST00000319980 GRIN3BO60391 1043 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 KRT18P05783 430 aaKnown RBP8.42□□□□□ -1.06
IFT88-201ENST00000319980 POLR2MP0CAP2 368 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 CYP11B2P19099 503 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 KLK7P49862 253 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 PABPC4Q13310 644 aaKnown RBP eCLIP8.42□□□□□ -1.06
IFT88-201ENST00000319980 HERC4Q5GLZ8 1057 aaPredicted RBP8.42□□□□□ -1.06
IFT88-201ENST00000319980 FAM26FQ5R3K3 315 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 CYP26C1Q6V0L0 522 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 SLC30A10Q6XR72 485 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 MYOCDQ8IZQ8 938 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 OR8K1Q8NGG5 319 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 CHP1Q99653 195 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 ZNF341Q9BYN7 854 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 NFKBIEO00221 500 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 SPATA31C1P0DKV0 1188 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 RPA1P27694 616 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 LRRC63Q05C16 580 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 TNIP1Q15025 636 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 TSR1Q2NL82 804 aaKnown RBP8.41□□□□□ -1.06
IFT88-201ENST00000319980 MIIPQ5JXC2 388 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 MTERF4Q7Z6M4 381 aaKnown RBP8.41□□□□□ -1.06
IFT88-201ENST00000319980 CCDC65Q8IXS2 484 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 ACRBPQ8NEB7 543 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 MAP7D2Q96T17 732 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 FGFBP2Q9BYJ0 223 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 RANBP17Q9H2T7 1088 aaKnown RBP8.41□□□□□ -1.06
IFT88-201ENST00000319980 AGPAT5Q9NUQ2 364 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 FECHP22830 423 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 CASQ1P31415 396 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 SLC12A3P55017 1021 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 ARSHQ5FYA8 562 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 FKBP15Q5T1M5 1219 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 SAMD7Q7Z3H4 446 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 LDHDQ86WU2 507 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 NELFCDQ8IXH7 590 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 ANKRD7Q92527 254 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 ERO1AQ96HE7 468 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 RGL1Q9NZL6 768 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 FEM1BQ9UK73 627 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 CAPN11Q9UMQ6 739 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 MRPL11Q9Y3B7 192 aaKnown RBP8.41□□□□□ -1.06
IFT88-201ENST00000319980 MYH7BA7E2Y1 1941 aa8.41□□□□□ -1.06
IFT88-201ENST00000319980 IGLV3-22A0A075B6J6 115 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 TRAF5O00463 557 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 FGFR1OPO95684 399 aaKnown RBP8.4□□□□□ -1.06
IFT88-201ENST00000319980 CYP3A4P08684 503 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 MAP3K10Q02779 954 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 FAM160B2Q86V87 743 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 PDCL2Q8N4E4 241 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 LRRN4CLQ8ND94 238 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 AGBL1Q96MI9 1066 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 TSG101Q99816 390 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 SLF1Q9BQI6 1058 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 NDST4Q9H3R1 872 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 ASTN2O75129 1339 aaPredicted RBP8.4□□□□□ -1.06
IFT88-201ENST00000319980 SBF1O95248 1867 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 PHF20L1A8MW92 1017 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 EML1O00423 815 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 CHMP2AO43633 222 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 YY1P25490 414 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 INPP5BP32019 993 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 DGKZQ13574 1117 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 TNFAIP1Q13829 316 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 TBC1D10BQ4KMP7 808 aaPredicted RBP8.4□□□□□ -1.06
IFT88-201ENST00000319980 VWA3BQ502W6 1294 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 ARHGAP29Q52LW3 1261 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 EIF2AK1Q9BQI3 630 aaKnown RBP8.4□□□□□ -1.06
IFT88-201ENST00000319980 WDR18Q9BV38 432 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 BHMT2Q9H2M3 363 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 POLD4Q9HCU8 107 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 VAV3Q9UKW4 847 aa8.4□□□□□ -1.06
IFT88-201ENST00000319980 DICER1Q9UPY3 1922 aaKnown RBP8.4□□□□□ -1.07
IFT88-201ENST00000319980 ABL1P00519 1130 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 FKBP3Q00688 224 aaKnown RBP8.4□□□□□ -1.07
IFT88-201ENST00000319980 ELF2Q15723 593 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 WDR59Q6PJI9 974 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 LRRC55Q6ZSA7 311 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 MICALL2Q8IY33 904 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 CPXCR1Q8N123 301 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 KCNV2Q8TDN2 545 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 TEPSINQ96N21 525 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 DNAJC7Q99615 494 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 NUP58Q9BVL2 599 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 FAM207AQ9NSI2 230 aaPredicted RBP8.4□□□□□ -1.07
IFT88-201ENST00000319980 CCPG1Q9ULG6 757 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.07
IFT88-201ENST00000319980 EPN1Q9Y6I3 576 aaPredicted RBP8.4□□□□□ -1.07
IFT88-201ENST00000319980 KIF5CO60282 957 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 PLA2G6O60733 806 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 NDUFA10O95299 355 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 ERCC6LQ2NKX8 1250 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 KIF4BQ2VIQ3 1234 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 CEP55Q53EZ4 464 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 LRCH2Q5VUJ6 765 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 OTOP1Q7RTM1 612 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms