RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 CCDC175P0C221 793 aa17.3■□□□□ 0.36
CGGBP1-201ENST00000309534 FKBP3Q00688 224 aaKnown RBP17.3■□□□□ 0.36
CGGBP1-201ENST00000309534 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
CGGBP1-201ENST00000309534 C16orf45Q96MC5 204 aaPredicted RBP17.3■□□□□ 0.36
CGGBP1-201ENST00000309534 EIF2AK1Q9BQI3 630 aaKnown RBP17.3■□□□□ 0.36
CGGBP1-201ENST00000309534 MAFGO15525 162 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 KIF5CO60282 957 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 PTPRAP18433 802 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 NIPA1Q7RTP0 329 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 TMTC1Q8IUR5 882 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 FMNL3Q8IVF7 1028 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 MNS1Q8NEH6 495 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 GTF3C2Q8WUA4 911 aaPredicted RBP17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 SLC10A4Q96EP9 437 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 TRMT1Q9NXH9 659 aaKnown RBP17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 SCAF8Q9UPN6 1271 aaKnown RBP17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 ALCAMQ13740 583 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 KIAA1328Q86T90 577 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 POTEB2H3BUK9 544 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 RETREG2Q8NC44 543 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 METTL14Q9HCE5 456 aaKnown RBP17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 KCND2Q9NZV8 630 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 SEL1LQ9UBV2 794 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 FRMD4BQ9Y2L6 1034 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 MYPNQ86TC9 1320 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 A0A087X0B3 334 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 VPS36Q86VN1 386 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 ATG4CQ96DT6 458 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 IVNS1ABPQ9Y6Y0 642 aa17.29■□□□□ 0.36
CGGBP1-201ENST00000309534 DLEC1Q9Y238 1755 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 E9PMD0 336 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 H0YCG3 227 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 STAM2O75886 525 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 P4HBP07237 508 aaKnown RBP17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 COASYQ13057 564 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 KCTD2Q14681 263 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 TBC1D7Q9P0N9 293 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 NRBP1Q9UHY1 535 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 WNT7AO00755 349 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 MSH4O15457 936 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 CEP135Q66GS9 1140 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 ERO1BQ86YB8 467 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 SPATA20Q8TB22 786 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 ZC3H15Q8WU90 426 aaKnown RBP17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 TUBGCP2Q9BSJ2 902 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 MMRN2Q9H8L6 949 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 WDR64B1ANS9 1081 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 PPP1R3GB7ZBB8 358 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 DSG3P32926 999 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 ABCD1P33897 745 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 EPHX2P34913 555 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 PRAMEF18Q5VWM3 479 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 CYP26C1Q6V0L0 522 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 TRPM4Q8TD43 1214 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 BHMT2Q9H2M3 363 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 KCNMB3Q9NPA1 279 aa17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.28■□□□□ 0.36
CGGBP1-201ENST00000309534 DDX60LQ5H9U9 1706 aaKnown RBP17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 RAD51AP2Q09MP3 1159 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 IL17AQ16552 155 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 TMEM119Q4V9L6 283 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 NAALADL2Q58DX5 795 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 SIAH1Q8IUQ4 282 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 NELFCDQ8IXH7 590 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 IFT74Q96LB3 600 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 NUCKS1Q9H1E3 243 aaKnown RBP17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 LTBP1Q14766 1721 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 STX10O60499 249 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 USO1O60763 962 aaKnown RBP17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 KRT83P78385 493 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 MAP3K10Q02779 954 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 KIAA1524Q8TCG1 905 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 LIMA1Q9UHB6 759 aaKnown RBP17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 PTGER2P43116 358 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 KRT31Q15323 416 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 EHBP1Q8NDI1 1231 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 PARVGQ9HBI0 331 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.36
CGGBP1-201ENST00000309534 MEIS1O00470 390 aa17.27■□□□□ 0.35
CGGBP1-201ENST00000309534 CCDC172P0C7W6 258 aa17.27■□□□□ 0.35
CGGBP1-201ENST00000309534 STXBP2Q15833 593 aa17.27■□□□□ 0.35
CGGBP1-201ENST00000309534 MAN2A1Q16706 1144 aa17.27■□□□□ 0.35
CGGBP1-201ENST00000309534 CEP63Q96MT8 703 aa17.27■□□□□ 0.35
CGGBP1-201ENST00000309534 PFASO15067 1338 aa17.26■□□□□ 0.35
CGGBP1-201ENST00000309534 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
CGGBP1-201ENST00000309534 POTEFA5A3E0 1075 aa17.26■□□□□ 0.35
CGGBP1-201ENST00000309534 MYMKA6NI61 221 aa17.26■□□□□ 0.35
CGGBP1-201ENST00000309534 PSAPP07602 524 aa17.26■□□□□ 0.35
CGGBP1-201ENST00000309534 POTEIP0CG38 1075 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms